Chromosomes between strains. Medical search. Frequent questions

By May 2023 about 350.000 Y chromosomes typed for 9-29 STR loci have been directly submitted by worldwide forensic institutions and universities. (wikipedia.org)
This causes the genes to become homozygous (same strain) at nearly all the loci on the chromosomes. (uwm.edu)
Arroyo-Pardo, E (2002) STR data for nine Y-chromosomal loci in Guinea Equatorial (central Africa). (ucm.es)
Arroyo-Pardo, E (2002) Frequency data of nine Y-chromosomal STR loci in a sample from Central Spain. (ucm.es)
In addition, we sequenced 99 ospC flanking sequences from different lineages and compared the complete cp26 sequences of 11 strains as well as the cp26 bbb02 loci of 56 samples. (cdc.gov)
Lateral gene transfers resulted in different linkages between the ospC gene and loci of the chromosome or other plasmids. (cdc.gov)

The mitotic spindle ensures the faithful segregation of chromosomes. (nature.com)
The mitotic spindle is a dynamic microtubule-based apparatus that ensures the segregation of chromosomes during cell division. (nature.com)
Chromosome segregation errors during meiosis are the leading cause of birth defects and developmental delays in humans ( H assold and H unt 2001 ). (biorxiv.org)
Scholars@Duke publication: Meiotic chromosome segregation in triploid strains of Saccharomyces cerevisiae. (duke.edu)
Using DNA microarrays and other physical approaches, we examined meiotic chromosome segregation in triploid strains of Saccharomyces cerevisiae. (duke.edu)
SMC5/6 is required for replication fork stability and faithful chromosome segregation during neurogenesis. (nih.gov)
The segregation pattern of chromosomes 14 and 18 were analysed in recombinant inbred strains of mice developed from KE and CBA/Kw strains. (edu.pl)
The present study demonstrates segregation for the putative Ahl gene and mapping of such a gene to Chromosome 10, consistent with other independent mapping of Ahl for AHL in 10 strains of mice [Johnson et al. (cdc.gov)
The present study was based on a conventional cross between two inbred strains, CBxB6.F(1) backcrossed to B6 with segregation for the putative +/Ahl:Ahl/Ahl. (cdc.gov)

There are over 400 documented inbred strains of mice. (uwm.edu)
The C57BL/6J (B6) and DBA/2J (D2) inbred strains of mice exhibit an age-related hearing loss (AHL) due to a recessive gene (Ahl) that maps to Chromosome 10. (cdc.gov)

We conclude that the congenic rat strains that we constructed for the chromosome 1 QTLs provide functional evidence for the role of gene systems within QTLs SS1a and SS1b in the blood pressure response to salt loading. (mdc-berlin.de)
We conclude that the TA-iaaM gene of 'large TA' strains is specifically required to counteract the tumour growth inhibiting activity of the T-ipt gene. (nih.gov)
Saccharomyces cerevisiae showed only minor alterations in growth and gene expression when its 16 chromosomes were combined. (the-scientist.com)
From Texas A&M University, Blanca Lupiani reported that she and her colleagues recently showed that insertion of LTR (long term repeat) sequences into the CVI988 resulted in the generation of CVRM, a virus with similar protective efficacy.The CVRM virus was cloned as a bacterial artificial chromosome, by insertion of mini-F sequences into the US2 gene by homologous recombination. (thepoultrysite.com)
Gene mutation (Bacterial reverse mutation assay / Ames test): negative with and without metabolic activation in Salmonella typhimurium strains TA 98, TA 100, TA 1535 and TA 1537 (OECD TG 471) (Hüls AG, 1998a). (europa.eu)
The defects in stem cell growth and self-renewal observed by the researchers can be alleviated by reducing the expression of just one gene on chromosome 21, they found. (sciencedaily.com)
The fact that people with Down syndrome have three copies of chromosome 21 and the Usp16 gene "accelerates the rate at which stem cells are used during early development, which likely exhausts stem cell pools and impairs tissue regeneration in adults with Down syndrome. (sciencedaily.com)
All of the available evidence supports a role for the Ahl gene in both AHL and NIHL among these strains of mice. (cdc.gov)
By acquisition of the complete part or a large part of a novel ospC gene, an otherwise adapted strain would assume a new serotypic identity, thereby being comparatively fitter in an area with a high prevalence of immunity to existing OspC types. (cdc.gov)
Over time, OspC genes were transferred between strains through recombinations involving the whole or parts of the gene and one or both flanks. (cdc.gov)
The ENG gene is found on chromosome 9 . (medlineplus.gov)
High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States. (cdc.gov)

To provide support for a functional role of these QTLs in relation to hypertension, we constructed congenic strains by replacing most of or selected segments from chromosome 1 from SBN/y with the homologous chromosomal regions of SBH/y, or reciprocally from SBH/y with segments of SBN/y, leaving the other chromosomes unperturbed. (mdc-berlin.de)
The phenotype of the congenic strains was tested by salt loading with DOCA-salt over a 4-wk period and measuring blood pressure by tail-cuff (in all animals) or radiotelemetry (in select groups) at baseline and during salt loading. (mdc-berlin.de)
telemetric measurements in the congenic strains introgressing both QTLs together, however, detected a significant rise in blood pressure after 3 and 4 wk of salt loading. (mdc-berlin.de)
Recombinant congenic strains are series of strains which have inherited one or more chromosomal fragments from a donor strain and all other DNA from the background strain. (rug.nl)

The use of yeast artificial chromosomes has enabled the rapid genetic reconstruction of the novel coronavirus. (the-scientist.com)
These artificial chromosomes are used extensively in molecular biology for the construction of comprehensive genomic libraries of higher organisms. (harvard.edu)

CDC monitors illness from a persisting, multidrug-resistant strain of Salmonella Newport linked to travel to Mexico, beef products obtained in the United States, and cheese obtained in Mexico. (cdc.gov)
In 2016, CDC identified a multidrug-resistant (MDR) strain of Salmonella enterica serotype Newport that is now monitored as a persisting strain (REPJJP01). (cdc.gov)
In 2016, CDC identified a multidrug-resistant (MDR) strain of Salmonella enterica serotype Newport that is now monitored as a persisting strain* named REPJJP01 and includes isolates from U.S. residents in all 50 states and the District of Columbia. (cdc.gov)
The test substance did not induce mutations (base-pair substitution and frame-shift type) in Salmonella typhimurium strains TA98, TA100, TA1535 and TA1537 as well as in E. coli WP2 uvr A both in presence and absence of metabolic activation (Harlan 2013). (europa.eu)
The assay (the SOS umu test) was based on the test agent inducing beta-galactosidase (GAL) activity in Salmonella- typhimurium strain (TA-1535/pSK1002). (cdc.gov)

strain CF27, new sequences were generated, and an update assembly and functional annotation were undertaken, followed by a comparative analysis with other Acidithiobacillus species whose genomes are publically available. (frontiersin.org)
Chromosomes in which fragments of exogenous DNA ranging in length up to several hundred kilobase pairs have been cloned into yeast through ligation to vector sequences. (harvard.edu)
Complete Genome Sequences for Three Chromosomes of the Burkholderia stabilis Type Strain (ATCC BAA-67). (cdc.gov)
High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps. (cdc.gov)
Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak. (cdc.gov)
Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25. (cdc.gov)

The results presented here clearly demonstrate the differences between the two biovar antiqua lineages and support the notion that grouping Y. pestis strains based strictly on the classical definition of biovars (predicated upon two biochemical assays) does not accurately reflect the phylogenetic relationships within this species. (asm.org)
Yersinia pestis has three sub species in which only two have been sequenced, strain KIM and strain CO92. (kenyon.edu)
CF27 have been identified that could be responsible for the phenotypic differences of this strain compared to other Acidithiobacillus species. (frontiersin.org)

Strain CO92 also consists of 4,012 protein-coding genes and 150 pseudogenes. (kenyon.edu)
Two strains may be bred together to produce a mixture of the genes of each strain. (uwm.edu)
This CEW genome assembly is composed of intact chromosomes and a comprehensive set of predicted genes. (usda.gov)
We used recombinant congenic mouse strains to map asthma susceptibility genes on mouse chromosome 17. (rug.nl)

Strain KIM consists of 4,600,755 base pairs and has a circular chromosome. (kenyon.edu)

Common inbred strains include BALB/c, C3H, C57BL/6 and DBA. (uwm.edu)

Transfer of LS chromosomes between otherwise genetically isolated strains explains the polyphyletic origin of host specificity and the emergence of new pathogenic lineages in F. oxysporum . (nature.com)
We previously detected by linkage analysis in segregating populations derived from crosses between the Sabra hypertension-prone rat (SBH/y) and the hypertension-resistant strain (SBN/y) two QTLs for salt susceptibility on chromosome 1, with sex specificity: in males SS1a and SS1b, and in females SS1b only. (mdc-berlin.de)

A new allelic variant of bla IMI-1 , which has two silent mutations compared to the original bla IMI-1 variant, was found in strain WCHECl-1060. (medscape.com)

Prior to the first meiotic division, homologous chromosomes pair, synapse, and recombine to ensure their proper disjunction at anaphase I. Additionally, telomeres tethered at the nuclear envelope cluster in the bouquet configuration where they are subjected to dramatic pulling forces acting from outside of the nucleus. (biorxiv.org)
Surprisingly, the nup2Δ ndj1Δ double mutant failed to segregate chromosomes, even though the meiotic program continued. (biorxiv.org)
The events of meiotic prophase follow a specialized round of DNA replication when the meiotic chromosome axis is formed. (biorxiv.org)
A . Schematic of the bouquet configuration of chromosomes during meiotic prophase I. The spatial arrangement of chromosomes with telomeres clustered and attached at the inner nuclear membrane is shown. (biorxiv.org)

In the case of chromosomal origin, microtubules instead nucleate around chromosomes and only later attach to kinetochores, as observed in Xenopus cell-free extracts 13 . (nature.com)
The Y Chromosome Haplotype Reference Database (YHRD) is an open-access, annotated collection of population samples typed for Y chromosomal sequence variants. (wikipedia.org)

The genotoxicity of complex chemical mixtures was studied in a chromosome assay. (cdc.gov)

and protein localization to chromosome, centromeric region. (nih.gov)
The results show that the chromosomes with small centromeric chromatin segregate preferentially. (edu.pl)

Of course, a Metapopulation concept on basis of "ethnicity" is by no means ideal, fully rational or fully translatable, but simply takes the fact into account that on a global level categories other than "nation" or "geography" far better describe the observed genetic clustering and inhomogeneity of Y chromosome patterns. (wikipedia.org)
The reasoning in doing so is twofold: first, language is an inherited cultural trait and thus the language phylae often correlate with genetic traits not the least to Y chromosome polymorphisms. (wikipedia.org)
Chromosome level ordering of the scaffolds was achieved by anchoring the assemblies either to a genetic map for Fv (ref. 7 ), or an optical map for Fol ( Supplementary Information A and Supplementary Table 2 ). (nature.com)
2010). Human Y chromosome haplogroup R-V88: A paternal genetic record of early mid Holocene trans-Saharan con- nections and the spread of Chadic languages. (scirp.org)
A comparison of four virulent Y. pestis strains with the human-avirulent strain 91001 provides further insight into the genetic basis of virulence to humans. (asm.org)

The CVI988 strain of Marek's disease virus (MDV) is a highly effective vaccine to protect chicken against very virulent strains of MDV. (thepoultrysite.com)

There is a relationship between protein aggregate structure (strain) and clinical phenotype in prion diseases, however, whether differences in the strains of α-synuclein aggregates account for the different pathologies remained unclear. (elifesciences.org)

Strains derived from some of the aneuploid spore colonies had very high frequencies of mitotic chromosome loss, resulting in genetically diverse populations of cells. (duke.edu)

We then started to map asthma susceptibility in the Lmr series of recombinant congenic and subcongenic strains. (rug.nl)

Two important objectives are pursued: (1) the generation of reliable frequency estimates for Y-STR haplotypes and Y-SNP haplotypes to be used in the quantitative assessment of matches in forensic and kinship cases and (2) the characterization of male lineages to draw conclusions about the origins and history of human populations. (wikipedia.org)

One α-synuclein fibril induced marked accumulation of phosphorylated α-synuclein and ubiquitinated protein aggregates, while the other did not, indicating the formation of α-synuclein two strains. (elifesciences.org)
We found 453 single nucleotide polymorphisms in protein-coding regions, which were used to assess the evolutionary relationships of these Y. pestis strains. (asm.org)
A chromosome-scale genome assembly of a Helicoverpa zea strain resistant to Bacillus thuringiensis Cry1Ac insecticidal protein. (usda.gov)
A chromosome-scale genome assembly of a Bacillus thuringiensis Cry1Ac insecticidal protein resistant strain of Helicoverpa zea. (usda.gov)
The properties of this strain that contribute to its usefulness as a protein expression strain are described below. (neb.com)
Thus DE3 strains may exhibit uninduced target protein expression. (neb.com)

The analysis was possible owing to the fact that the C-band on chromosomes 14 of the CBA/Kw strain and that of chromosome 18 of the KE strain show size polymorphism: while the CBA/Kw mice have a small sized C-band on chromosome 14, the KE mice show small C-bands on chromosome 18. (edu.pl)

Our analysis revealed lineage-specific (LS) genomic regions in F. oxysporum that include four entire chromosomes and account for more than one-quarter of the genome. (nature.com)
To further investigate the genomic diversity among this group and to help characterize lineages of the plague organism that have no sequenced members, we present here the genomes of two isolates of the "classical" antiqua biovar, strains Antiqua and Nepal516. (asm.org)

Arroyo-Pardo, E (2002) Three Y-chromosome STR frequencies in a population from Equatorial Guinea (Central Africa). (ucm.es)

Though both strains belong to one of the three classical biovars, they represent separate lineages defined by recent phylogenetic studies. (asm.org)
For genealogy within the most recent fifteen generations, STR markers help define paternal lineages. (familytreedna.com)

Aneuploid yeast strains exhibit defects in cell growth and passage through START. (harvard.edu)

The ubiquitous grapevine-associated octopine/cucumopine Ti plasmids of biotype III Agrobacterium tumefaciens strains carry two T regions, TA and TB, with a complex oncogene arrangement. (nih.gov)
Agrobacterium tumefaciens str. (nih.gov)

Within the octopine/cucumopine group, two main strain types were identified: 'large TA' strains with a TA region resembling the TL region of the biotype I octopine strain Ach5 and 'small TA' strains with a similar T region organization as the 'large TA' strains but with a large internal TA deletion. (nih.gov)
Several cases of chromosome 10p deletion have also been reported in which affected individuals have some features of DiGeorge syndrome. (medscape.com)

Using novel methods developed by a team of ARS scientists from the Ag100Pest Initiative and university collaborators, a high-quality genome assembly was generated for a Bt resistant strain of CEW. (usda.gov)
In order to facilitate understanding of these biological and ecological characteristics, we generated a high-quality chromosome-level assembly for a single H. zea male from Bt resistant strain, HzStark_Cry1AcR. (usda.gov)

These results provide a possible molecular mechanism to account for the different pathologies induced by different α-synuclein strains. (elifesciences.org)

We sequenced Fv strain 7600 and Fol strain 4287 (Methods, Supplementary Table 1 ) using a whole-genome shotgun approach and assembled the sequence using Arachne ( Table 1 , ref. 6 ). (nature.com)
Strain WCHECl-1060 belongs to a new sequence type, ST410, and was resistant to carbapenems and colistin but was susceptible to third-generation cephalosporins. (medscape.com)

Chromosomes, Artificial, Yeast" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings) . (harvard.edu)

DNA genealogy of major haplogroups of Y chromosome (Part 1). (scirp.org)

Orthologous to human SMC5 (structural maintenance of chromosomes 5). (nih.gov)
Structural and functional studies of the representative 'large TA' strain Tm4 revealed six oncogenes. (nih.gov)
In a chromosome aberration test in CHO-WBL cells, structural (with metabolic activation) and numerical (without metabolic activation) aberrations were reported after 3-hour treatment at concentrations up to cytotoxicity. (europa.eu)
Further examination indicated that structural differences in the C-terminal region of α-synuclein strains lead to different effects on proteasome activity. (elifesciences.org)

CDC defined REPJJP01 as a strain of S. Newport with a range of 0-21 allele differences by cgMLST. (cdc.gov)
Previous studies have compared ancestral and epidemic ZIKV strains to identify strain differences that may contribute to vertical transmission and fetal disease. (bvsalud.org)

In 2021, the number of isolates of this strain approximately doubled compared with the 2018-2020 baseline and remained high in 2022. (cdc.gov)

The OmpT protease resides at the surface of wild type E. coli in both K-12 and B strains, presumably helping the cells to derive amino acids from their external environment. (neb.com)
92% were tropic HIV-1 strains into target cells [ 5-7 ]. (who.int)

Genome sequencing and transcriptome analysis of Trichoderma reesei QM9978 strain reveals a distal chromosome translocation to be responsible for loss of vib1 expression and loss of cellulase induction. (france-genomique.org)

For a test compound to be considered positive, it must (in two independent experiments) cause at least a doubling in the mean revertants per plate of at least one tester strain. (europa.eu)

Neither the origin of the Y chromosome nor the sex of the parental strain had any significant impact on the magnitude of the blood pressure response to salt loading. (mdc-berlin.de)
Conjugation and transformation experiments failed to transfer bla IMI-1 , suggesting a likely chromosome origin. (medscape.com)

The columns display each project member's kit number, paternal ancestry information according to project settings, the paternal tree branch (haplogroup), and actual STR marker results. (familytreedna.com)
Above each subgroup, we display the minimum, maximum and mode values for each STR marker in the subgroup. (familytreedna.com)
STR marker values that differ from the mode values are color-coded. (familytreedna.com)

Y-DNA STR markers change (mutate) often enough that most men who share the same STR results also share a recent paternal lineage. (familytreedna.com)

In toto , our results show that the connection between centrosomes and chromosomes is mediated by an anchoring into the entire spindle network and that any direct connections through KMTs are few and likely very transient. (nature.com)
The insects' insides provide a favorable environment for outcrossing in domestic and wild yeast strains, scientists show. (the-scientist.com)
A recent study compared both these strains to show that one of these strains may have evolved from the other throughout the years. (kenyon.edu)
These strains show different intensities and types of asthmatic response, which indicates that this approach could successfully be used for asthma genetics. (rug.nl)

DNA Genealogy, mutation rates, and some historical evidences written in Y-chromosome. (scirp.org)
Mutation rate constants in DNA genealogy (Y chromosome). (scirp.org)
This case study is on a 14-year-old patient diagnosed with a very aggressive form of ALL (positive for the Philadelphia chromosome mutation). (karger.com)
Cannabinoid resin extract is used as an effective treatment for ALL with a positive Philadelphia chromosome mutation and indications of dose-dependent disease control. (karger.com)
Upon further analysis, she was found to be positive for the Philadelphia chromosome mutation. (karger.com)
A mutation in the Philadelphia chromosome is a much more aggressive form of ALL. (karger.com)

Although λ DE3 is normally dormant in the host chromosome, the induction of the SOS response can occur as the result of expressing proteins that damage the E. coli chromosome, either directly or indirectly. (neb.com)
E. coli B strains are 'naturally' deficient in the Lon protease which in K-12 strains serves to degrade misfolded proteins and to prevent some cell cycle-specific proteins from accumulating. (neb.com)

This graph shows the total number of publications written about "Chromosomes, Artificial, Yeast" by people in Harvard Catalyst Profiles by year, and whether "Chromosomes, Artificial, Yeast" was a major or minor topic of these publication. (harvard.edu)

Evaluation оf the сonvergence оf sets in STR phylogeny and analysis оf the haplogroup R1a1 tree. (scirp.org)

Shanika Kurukulasuriya of the Western College of Veterinary Medicine at the University of Saskatchewan in Canada explained recent studies have demonstrated that the majority of Infectious Bursal Disease Viruses (IBDVs) circulating in Canada are 'variant' strains and capable of immunosuppression in broilers. (thepoultrysite.com)

Cold case: The disappearance of Egypt bee virus, a fourth distinct master strain of deformed wing virus linked to honeybee mortality in 1970's Egypt. (usda.gov)

Anatomy62

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Psychiatry and Psychology1

Phenomena and Processes165

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20021

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