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  • genome
  • However, except for the X. citri phages Cf and XacF1, complete genome sequence information about lysogenic Xanthomonas phages is not available to date. (deepdyve.com)
  • A proviral sequence of Xf109 phage was identified in the genome of Xanthomonas oryzae, the rice bacterial blight pathogen, and revived as infectious virions to lysogenize its host de novo. (deepdyve.com)
  • The genome of Xf109 phage is 7190 nucleotides in size and contains 12 predicted open reading frames in an organization similar to that of the Cf phage genome. (deepdyve.com)
  • Integration of Xf109 phage DNA into the host genome is site-specific, and the attP/attB sequence contains the dif core sequence 5'-TATACATTATGCGAA-3', which is identical to that of Cf, XacF1, and Xanthomonas campestris phage ϕLf. (deepdyve.com)
  • The genome of ϕRs551 was identified with 100% identity in the deposited genomes of 11 race 3 biovar 2 phylotype IIB sequevar 1 strains of R. solanacearum , indicating evolutionary and biological importance, and ORF14 of ϕRs551 was annotated as a putative type-2 repressor. (frontiersin.org)
  • Metagenomic analysis of virus populations ("viromics") has provided insight into the surprising extent that phages modulate the bacterial genome. (springer.com)
  • Based on the presence of an RNA polymerase in their genomes and their overall genome architecture, these phages should be classified in the subfamily of the Autographivirinae , within the genus of the "phiKMV-like viruses. (asm.org)
  • bacteria
  • Identify and characterize genes and/or phages affecting virulence and competitiveness of those bacteria to develop effective control methods. (usda.gov)
  • Studies in natural environments, and by manipulations of phages and bacteria in a laboratory setting, have demonstrated that phages can profoundly influence bacterial populations. (springer.com)
  • The genetic traits acquired from phages can influence adaptation of bacteria to an environment by providing enhanced or novel metabolic properties, resistance to other phages or protozoan predators, and acquisition of antibiotic resistance or new virulence traits. (springer.com)
  • In this chapter, we will discuss how phages influence the fitness of bacteria in particular environmental niches. (springer.com)
  • Classical cryo-EM coupled with image analysis, tomography of bacteria infected by the phages with cellular EM techniques (CEMOVIS for example), and other techniques will be employed to address different aspects of the phage life cycle. (ibs.fr)
  • The apparent lack of suitable genetic methods such as random mutagenesis with transposable elements, which is a widely used approach to characterize bacteria genetically and functionally, appears to be the reason for the delay of the characterization of this human pathogen. (asm.org)
  • novel
  • While the benefit to the phages for transferring novel properties to its host is often poorly understood, this relationship clearly provides a selective advantage because these properties are maintained in many environments and including otherwise adverse conditions for the bacterial host. (springer.com)
  • genera
  • Phylogenetic analysis of all the sequenced members of the Autographivirinae supports the classification of phages LIMElight and LIMEzero as members of the "phiKMV-like viruses" and corroborates the subdivision into the different genera. (asm.org)
  • jumbo
  • It is also the highest resolution achieved for the baseplate and the head of a jumbo phage. (ibs.fr)
  • These 3D structures also confirm that the jumbo phage share the same fold as other phages (at least for the head and the helical tail). (ibs.fr)
  • Biotechnology
  • Biotechnology, Pharma and Biopharma News - Research - Science - Lifescience ://Biotech-Biopharma-Pharma: Paramount Recruitment: Phage Display Scientist - Cambridge - 9 mo. (bioportfolio.com)
  • The aim of this review article is to enable the wide range of researchers, scientists, and biotechnologist who are putting phages into practice, to accelerate the progress and development in the field of biotechnology. (biomedcentral.com)
  • protein
  • Altered plasma apolipoprotein modifications in patients with pancreatic cancer: protein characterization and multi-institutional validation. (jove.com)
  • life cycle
  • Electron microscopy is a particularly suitable tool to study the phage life cycle, which will make full use of the instruments and expertise of the group. (ibs.fr)
  • Studies
  • We would like to further develop our studies on phages, a subject in which we have collaboration with an IBS group (C Breyton) and also groups in Paris, Japan and Belgium. (ibs.fr)
  • develop
  • The Company's mission is to develop proprietary Phage-based anti-infective therapeutics to combat the increasing number of antibiotic-resistant infections worldwide. (bioportfolio.com)
  • knowledge
  • This result is, to our knowledge, the highest available resolution for a phage tail. (ibs.fr)
  • tool
  • The improvement in sequencing technology that sparked the microbial metagenomic revolution has provided another tool for understanding the impact of phages on bacterial populations. (springer.com)