Cell-Free SystemGene Expression ProfilingGene ExpressionGene Expression RegulationRNA, MessengerProtein BiosynthesisBase SequenceTranscription, GeneticMolecular Sequence DataCell LineDNAOligonucleotide Array Sequence AnalysisCells, CulturedKineticsGene Expression Regulation, DevelopmentalEscherichia coliPromoter Regions, GeneticGene Expression Regulation, NeoplasticReverse Transcriptase Polymerase Chain ReactionTranscription FactorsGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGene Expression Regulation, BacterialGene Expression Regulation, ViralDNA-Binding ProteinsSignal TransductionFree RadicalsCluster AnalysisTranscriptomeGene Expression Regulation, FungalGenes, ReporterMicroarray AnalysisUp-RegulationMutationTransfectionBlotting, NorthernRNACell DifferentiationTime FactorsDNA PrimersTranscriptional ActivationDown-RegulationCell Line, TumorNuclear ProteinsIn Situ HybridizationTrans-ActivatorsGene Regulatory NetworksLiverRepressor ProteinsPolymerase Chain ReactionMice, Inbred C57BLDNA, ComplementaryPhenotypeAmino Acid SequenceReal-Time Polymerase Chain ReactionProtein BindingBinding SitesModels, GeneticComputational BiologyModels, BiologicalTumor Cells, CulturedLuciferasesAlgorithmsBlotting, WesternHomeodomain ProteinsCell NucleusOrgan SpecificityRats, Sprague-DawleyReproducibility of ResultsPlasmidsHistonesDatabases, GeneticMicroRNAsCloning, MolecularGenetic VectorsImmunohistochemistryMice, TransgenicEpigenesis, GeneticRegulatory Sequences, Nucleic AcidGene SilencingEnhancer Elements, GeneticExpressed Sequence TagsResponse ElementsChromatin ImmunoprecipitationBacterial ProteinsDNA MethylationMultigene FamilyProteinsFibroblastsArabidopsisChromatinSequence Analysis, DNARNA InterferenceCell ProliferationRNA, Small InterferingMice, KnockoutNF-kappa BHeLa CellsGene LibraryGenes, Plant