Protease InhibitorsHIV Protease InhibitorsSerine Proteinase InhibitorsHIV ProteaseSerine EndopeptidasesPeptide HydrolasesSecretory Leukocyte Peptidase InhibitorBiologyEndopeptidasesSaquinavirIndinavirRitonavirProteinase Inhibitory Proteins, SecretoryTrypsin InhibitorsNelfinavirSerpinsCysteine ProteasesSystems BiologyMolecular Sequence DataCysteine EndopeptidasesAmino Acid SequenceCysteine Proteinase InhibitorsProtease NexinsCarbamatesLopinaviralpha 1-AntitrypsinPyrimidinonesDrug Resistance, ViralAprotininProtease LaTosyllysine Chloromethyl KetoneHIV-1GabexateOligopeptidesATP-Dependent ProteasesHIV InfectionsTrypsin Inhibitor, Bowman-Birk SoybeanPepstatinsAnti-HIV AgentsAntipainCathepsinsMolecular BiologyDevelopmental BiologyTosylphenylalanyl Chloromethyl KetonePhenylmethylsulfonyl FluorideTrypsin Inhibitor, Kunitz SoybeanSubstrate SpecificityCystatinsLeupeptinsChymotrypsinPancreatic ElastaseReverse Transcriptase InhibitorsMutationBase SequenceTrypsinKineticsSynthetic BiologyComputational BiologyRecombinant ProteinsModels, MolecularSerpin E2Cell LineLeukocyte ElastaseAspartic Acid EndopeptidasesDrug Resistance, Multiple, ViralSerine ProteasesSulfonamidesMolecular WeightElectrophoresis, Polyacrylamide GelSubtilisinsAntiretroviral Therapy, Highly Activealpha-MacroglobulinsBinding SitesCalpainElafinHydrolysisCathepsin LProtein BindingMetalloendopeptidasesProtein Processing, Post-TranslationalCells, CulturedSequence Homology, Amino AcidCloning, MolecularCathepsin GViral Nonstructural ProteinsTrypsin Inhibitor, Kazal PancreaticProteinsChymasesViral LoadMethylurea CompoundsAntiviral AgentsProtein Structure, TertiaryPyronesPapainSequence Alignmentalpha 1-AntichymotrypsinModels, BiologicalProteolysisCrystallography, X-RayStructure-Activity Relationship