Gene Expression RegulationGene Expression ProfilingBacteriaGene Expression Regulation, PlantOligonucleotide Array Sequence AnalysisMicroRNAsGene Expression Regulation, DevelopmentalGene ExpressionRNA, MessengerTranscription, GeneticMolecular Sequence DataPromoter Regions, GeneticBase SequenceRNA, UntranslatedTranscription FactorsComputational BiologyChromatinGenomeBinding SitesModels, GeneticGene Expression Regulation, ArchaealGene Expression Regulation, NeoplasticGene Expression Regulation, FungalAlgorithmsNucleic Acid ConformationGram-Negative BacteriaGram-Positive BacteriaReverse Transcriptase Polymerase Chain ReactionGene Expression Regulation, BacterialSequence Analysis, DNAAmino Acid SequenceSignal TransductionCell LineTranscriptomeBacteria, AnaerobicBacterial ProteinsGene Expression Regulation, EnzymologicDNA-Binding ProteinsRNA StabilityGene Regulatory NetworksCells, CulturedDown-RegulationModels, BiologicalPhylogenyEvolution, MolecularRNA, Ribosomal, 16SUp-RegulationDNA, BacterialEscherichia coliSequence Analysis, RNAGene Expression Regulation, Viral3' Untranslated Regions5' Untranslated RegionsCell Line, TumorEpigenesis, GeneticArabidopsisConserved SequenceAlternative SplicingBacteria, AerobicMutationHistonesDNA MethylationDNA, RibosomalGene Expression Regulation, LeukemicCluster AnalysisSoftwarePhenotypePolymerase Chain ReactionGenes, BacterialCloning, MolecularSpecies SpecificityDNA PrimersRNA, BacterialTime FactorsWater MicrobiologyPlasmidsProtein BindingCulture MediaGenes, ReporterAnti-Bacterial AgentsBacterial Physiological PhenomenaSequence Homology, Amino AcidGram-Negative Aerobic BacteriaSoil MicrobiologyGram-Negative Anaerobic BacteriaMice, Inbred C57BLTransfectionRNASequence AlignmentMicroarray AnalysisKineticsRepressor ProteinsBlotting, NorthernAnaerobiosisSeawaterCell DifferentiationSymbiosisGenome, BacterialLiverTrans-Activators