KlebsiellaEscherichiaAerogenesIsolatesCitrobacterPathogensPseudomonasEnterobacteriaceaePredominantSpeciesOrganismSakazakiiPneumoniaeGenesGenusSubspIdentified by 16S rDNAESBLStrainsColiEpidemiologicalClinically significantATCCMultivariate logistic regressionCarbapenemBloodstream infectionsBacteriumKobeiPatientsSamplesAntibioticClinicalPathogenInfectionsClosely relatedStrainDetectionComplexCharacterizationLogistic regression analysisMetagenomic analysisLaboratoriesMass spectrometryLaboratoryMethodMolecular analysisTest
Klebsiella12
- Carbapenems continue to have the best activity against E cloacae, E aerogenes, (now known as Klebsiella aerogenes ) and other Enterobacter species. (medscape.com)
- Resumen Introducción: La expresión de β-lactamasas CTX-M pertenecientes a los grupos 1 y 9 en Klebsiella pneumoniae produce grados altos de resistencia a ceftazidima, y presentan una amplia distribución mundial. (bvsalud.org)
- The isolates (n 45) included the following microorganisms: Klebsiella quasipneumoniae (n = 12), Escherichia coli (n = 10), Enterobacter cloacae complex (n = 10), Klebsiella pneumoniae (n = 8), Klebsiella variicola (n = 2), Raoultella ornithinolytica (n = 1), Citrobacter freundii (n = 1), and Citrobacter amalonaticus (n = 1). (ncku.edu.tw)
- The isolates were identified as Klebsiella pneumoniae (n=9), Escherichia coli (n=6), Enterobacter cloacae complex (n=5) and Enterobacter spp. (afpm.org.my)
- Here we report the disrupted transmission of maternal Bacteroides strains, and high-level colonization by opportunistic pathogens associated with the hospital environment (including Enterococcus , Enterobacter and Klebsiella species), in babies delivered by caesarean section. (nature.com)
- The top three CRE strains were Klebsiella pneumoniae (63.9%, 85/133), Enterobacter cloacae (15.0%, 20/133) and Serratia marcescens (6.0%, 8/133). (rdbzz.com)
- mrc-1 positivity also was found in 13 isolates of Klebsiella pneumoniae , and 1 isolate each of Enterobacter cloacae and Enterobacter aerogenes . (medscape.com)
- Para a tipagem molecular foi realizado PFGE e MLST (somente para Escherichia coli) Foram encaminhadas ao Laboratório de Pesquisa em Infecção Hospitalar da Fundação Oswaldo Cruz, 83 amostras produtoras de KPC-2 (correspondendo as espécies: Enterobacter aerogenes, Enterobacter cloacae, Escherichia coli, Pantoea agglomerans, Providencia stuartii, Citrobacter freundii, Klebsiella oxytoca, Morganella morganii e Serratia marcescens) provenientes de 9 estados das regiões sudeste, nordeste e centro-oeste do país. (fiocruz.br)
- In this collection are preserved approximately 8,000 strains of bacteria representing 30 distinct species among the most frequently cited: Methicillin Resistant Staphylococcus aureus (MRSA), Klebsiella pneumoniae, Pseudomonas aeruginosa, Acinetobacter baumannii, Enterobacter cloacae, Entrobacter aerogenes and Serratia marcescens, isolated form cases of septicemia, meningitis, penumonias among others. (specieslink.net)
- In this study, we molecularly characterized 12 NDM-1 producing clinical Enterobacteriaceae ( Klebsiella pneumoniae , Escherichia coli , Enterobacter cloacae ) isolates that were part of a collection of non-carbapenem susceptible isolates obtained during a one-year period. (who.int)
- The 52 isolates comprised the following species: 31 Klebsiella pneumoniae , 13 Escherichia coli , seven Enterobacter cloacae and one Enterobacter aerogenes . (who.int)
- Klebsiella , Enterobacter , and Serratia Infections The gram-negative bacteria Klebsiella , Enterobacter , and Serratia are closely related normal intestinal flora that rarely cause disease in normal hosts. (msdmanuals.com)
Escherichia3
- Carbapenem-resistant Escherichia coli occurs infrequently, but recent outbreaks of KPC-producing Enterobacter cloacae raise concerns about the emergence of carbapenem resistance in the E. cloacae complex ( 1 - 4 ). (cdc.gov)
- FusA allele sequencing revealed that 49/52 strains were Cronobacter sakazakii, while the remaining 3 strains were Escherichia coli, Enterobacter cloacae, and Franconibacter helveticus . (biomedcentral.com)
- The resistance by the ESBL production mechanism is predominant especially for Enterobacter cloacae and Escherichia coli. (univ-reunion.fr)
Aerogenes2
- Enterobacter aerogenes, Pseudomonas sp. (afpm.org.my)
- As espécies mais resistentes foram E. aerogenes, E. cloacae, C. freundii e K. oxytoca. (fiocruz.br)
Isolates12
- We identified 224,651 K. pneumoniae and 71,462 E. cloacae complex ( E. cloacae, E. asburiae, E. kobei, E. hormaechei, E. xiafangensis ) isolates from patients hospitalized during 2006-2015. (cdc.gov)
- After these exclusions, 128,431 K. pneumoniae and 38,219 E. cloacae complex isolates from 140 facilities in 40 states, District of Columbia, and Puerto Rico remained for study. (cdc.gov)
- Of the total of 91 isolates, 89 were E. coli, one was Citrobacter youngae and one was Enterobacter cloacae. (who.int)
- PCR analysis revealed that 78 isolates (85.7%) produced CTX-M group 1 ESBLs while six isolates (6.6%) produced CTX-M group 9 enzymes. (who.int)
- Molecular typing using repetitive sequenced-based PCR (rep-PCR) and hsp60 sequencing were applied to a collection of diverse Enterobacter cloacae complex isolates. (paijournal.com)
- To determine the most practical method for reference laboratories, we analyzed 71 E. cloacae complex isolates from sporadic and outbreak occurrences originating from 4 geographic areas. (paijournal.com)
- The phylogenetic analysis grouped the K. pneumoniae isolates into 4 clusters, showing correlation in clusters I, II and IV, when comparing the genetic profiles with the type of sample and group of genes. (bvsalud.org)
- The isolates identified by 16S rDNA and biochemical analysis as Enterobacter cloacae (Persian Type Culture Collection (PTCC). (sharif.edu)
- Array analysis revealed 18 isolates with ESBL genes and one isolate with solely non-ESBL beta-lactamase genes. (afpm.org.my)
- On phylogenetic analysis there were three genetic clusters of E. cloacae containing both clinical and environmental isolates, and an additional four clusters restricted to either reservoir. (ox.ac.uk)
- In the cross-sectional analysis, the 76 MCRPEC isolates were significantly more resistant to several other drugs compared with isolates that were mcr-1 negative, including ciprofloxacin ( P = .0005), cefotaxime ( P = .0005), and cefepime ( P = .001). (medscape.com)
- The aim of this study was to perform a genotyping analysis of the Pseudomonas aeruginosa -resistant isolates by the multilocus sequence typing (MLST) method at the university teaching hospital in Iran. (advbiores.net)
Citrobacter2
- Predictors of in-hospital mortality for bloodstream infections caused by Enterobacter species or Citrobacter freundii. (medscape.com)
- Phylogenetic analysis of partial 16S rRNA (rrs) sequences combined with the results of biochemical tests allowed to identify the six strains as Citrobacter freundii. (unipa.it)
Pathogens2
- This observation suggests that ECC are emerging pathogens, requiring for detailed understanding on their genomic epidemiology including transmission dynamics and antimicrobial resistance profiles.Patients and methodsWe performed WGS on 79 Enterobacter spp. (ox.ac.uk)
- Investigation revealed recurrent urinary pathogens, including Enterobacter cloacae and persistent BK viruria. (cdc.gov)
Pseudomonas1
- and Pseudomonas aeruginosa (OR 2·26, 95% CI 1·70 - 3·06), Enterobacter cloacae (OR 2·31, 95% CI 1·53 - 3·66), Serratia marcescens (OR 2·34, 95% CI 1·33 - 4·52) and Stenotrophomonas maltophilia (OR 17·94, 95% CI 3·98 - 314·43) were overrepresented in the referral cohort. (elsevierpure.com)
Enterobacteriaceae3
- In August 2017, meropenem/vaborbactam (Vabomere) was approved for complicated urinary tract infections (cUTIs), including pyelonephritis, caused by susceptible Enterobacteriaceae: E coli, K pneumoniae, and E cloacae species complex. (medscape.com)
- Here, we characterized carbapenemase-producing Enterobacteriaceae (CPE) in wastewater by whole-genome analysis. (ncku.edu.tw)
- nov., a new species of the family Enterobacteriaceae resembling Enterobacter cloacae. (dsmz.de)
Predominant2
- E. cloacae SG208 identified as a predominant microorganism in mixed culture isolated from petrochemical sludge (IOCL, Guwahati) responsible for degradation of benzene was reported by Padhi and Gokhale (2016). (wikipedia.org)
- Enterobacter cloacae was the predominant organism, with 12 other species mainly found in either the environment or patients, some persisting despite several cleaning methods. (ox.ac.uk)
Species4
- However, before 2008 the genus was regarded as a single species named Enterobacter sakazakii which was subdivided into 8 phenotypes. (biomedcentral.com)
- Until 2007 the Cronobacter genus was known as the single species Enterobacter sakazakii . (biomedcentral.com)
- ObjectivesCommunity-onset bloodstream infections (BSIs) caused by carbapenemase-producing Enterobacter cloacae complex (ECC) species are increasing internationally. (ox.ac.uk)
- Yan QQ, Condell O, Power K, Butler F, Tall BD, Fanning S. Cronobacter species (formerly known as Enterobacter sakazakii) in powdered infant formula: a review of our current understanding of the biology of this bacterium. (medscape.com)
Organism1
- Enterobacter cloacae is considered a biosafety level 1 organism in the United States and level 2 in Canada. (wikipedia.org)
Sakazakii5
- This study re-analyzed, using multi-locus sequence typing (MLST) and whole genome sequence with single nucleotide polymorphism analysis (WGS-SNP), 52 strains which had been identified as Enterobacter sakazakii as according to the convention at the time of isolation. (biomedcentral.com)
- WGS-SNP analysis of the 32 C. sakazakii ST13 strains revealed 5 clusters and 5 unique strains which did not correlate with the country of product origin. (biomedcentral.com)
- Cerebral infarctions due to CNS infection with Enterobacter sakazakii. (medscape.com)
- Enterobacter sakazakii: an emerging pathogen in powdered infant formula. (medscape.com)
- Enterobacter sakazakii). (medscape.com)
Pneumoniae6
- We used this infrastructure to observe national trends of carbapenem resistance and nonsusceptibility in K. pneumoniae and E. cloacae complex during the past decade. (cdc.gov)
- Our data capture the chronologic and geographic spread of carbapenem-resistant K. pneumoniae and E. cloacae complex within VHA ( Figure ). (cdc.gov)
- Objetivo: Identificar y caracterizar los genes blaCTX-M-Grupo1 y blaCTX-M-Grupo9 en aislados de K. pneumoniae resistentes a ceftazidima en un hospital de San José de Cúcuta, Colombia. (bvsalud.org)
- Material y Método: Se diseñaron partidores para la identificación de K. pneumoniae y los genes blaCTX-M mediante reacción de polimerasa en cadena (RPC). (bvsalud.org)
- El análisis filogenético agrupó los aislados de K. pneumoniae en cuatro clusters, mostrando correlación en los clusters I, II y IV, al comparar los perfiles genéticos con el tipo de muestra y grupo de genes. (bvsalud.org)
- Discusión: Se encontró una frecuencia similar de los genes blaCTX-M-Grupo1 y blaCTX-M-Grupo 9 en aislados de K. pneumoniae resistentes a ceftazidima. (bvsalud.org)
Genes2
- sin embargo, presentó cinco de los seis genes de virulencia presentes en la isla de patogenicidad homóloga denominada VPaI-7 del V. parahaemolyticus (vcs N2+, vcs C2+, vcs V2+,toxR-, vspD+, T vopF+). (bvsalud.org)
- Analysis included identification by MALDI-TOF mass spectrometry, susceptibility testing, XbaI-PFGE, microarray, PCR and sequencing of specific ESBL genes, PCR based replicon typing (PBRT) of plasmids and Southern blot hybridization. (afpm.org.my)
Genus1
- This was the first report of a PVA degrader from the Enterobacter genus. (wikipedia.org)
Subsp4
- Enterobacter cloacae subsp. (wikipedia.org)
- citation needed] A draft genome sequence of Enterobacter cloacae subsp. (wikipedia.org)
- P. GenBank New holotype for Enterobacter cloacae subsp. (wikipedia.org)
- Draft Genome Sequence of Enterobacter cloacae subsp. (wikipedia.org)
Identified by 16S rDNA1
- cloacae strain PR-4 was isolated and identified by 16S rDNA gene sequence with phylogenetic tree view from explosive-laden soil by P. Ravikumar (GenBank accession number KP261383). (wikipedia.org)
ESBL1
- In early 2014 an outbreak with extended-spectrum β-lactamase (ESBL)-producing Enterobacter cloacae was identified in our ICU that could be related to contaminated sinks. (biomedcentral.com)
Strains5
- Bioinformatic analysis was then used to analyze the relatedness and global dissemination of these strains. (biomedcentral.com)
- The WGS-SNP analysis demonstrated that indistinguishable Cronobacter strains within a sequence type can be unrelated, and may originate from multiple sources. (biomedcentral.com)
- The use of WGS-SNP analysis to distinguishing of strains within a sequence type has important relevance for tracing the source of outbreaks due to Cronobacter spp. (biomedcentral.com)
- Similarly, rrs sequence analysis identified as Enterobacter hormaechei 23 strains originally ascribed to Enterobacter cloacae by the API 20E system. (unipa.it)
- The Culture Collection of Hospital-Acquired Bacteria, acronym CCBH, is located at the Research Laboratory in nosocomial infection (LAPIH), and performs bacteriological, epidemiological and molecular analysis for strains isolated from nosocomial infection. (specieslink.net)
Coli1
- The mis-identification of E. coli, E. cloacae and F. helveticus as Cronobacter spp. (biomedcentral.com)
Epidemiological1
- 3. Haertl R, Bandlow G. Epidemiological fingerprinting of Enterobacter cloacae by small-fragment restriction endonuclease analysis and pulsed-field gel electrophoresis of genomic restriction fragments. (paijournal.com)
Clinically significant1
- Enterobacter cloacae is a clinically significant Gram-negative, facultatively-anaerobic, rod-shaped bacterium. (wikipedia.org)
ATCC1
- and Enterobacter cloacae ), a Gram-positive bacterium ( Staphylococcus aureus ATCC 25923), and a fungus ( Candida albicans ) showed a broad spectrum of activity. (academicjournals.org)
Multivariate logistic regression3
- Univariate and multivariate logistic regression analyses were performed to determine the risk factors for CRE infection. (rdbzz.com)
- Multivariate logistic regression analysis showed that patients transferred to ICU from another hospital, exposure to glucocorticoids, carbapenems and glycopeptides before infection were independent risk factors for nosocomial CRE infections in ICU patients. (rdbzz.com)
- Bivariate and multivariate logistic regression models were applied in data analysis. (bvsalud.org)
Carbapenem1
- In 2006-2007, carbapenem-resistant E. cloacae complex also had a focus in the East, but in 2008-2009, it was also observed in Region 8. (cdc.gov)
Bloodstream infections1
- Genomic epidemiology, antimicrobial resistance and virulence factors of Enterobacter cloacae complex causing potential community-onset bloodstream infections in a tertiary care hospital of Nepal. (ox.ac.uk)
Bacterium1
- Enterobacter kobei DSM 27110 is a mesophilic bacterium that was isolated from blood of a diabetic patient. (dsmz.de)
Patients2
- Méthodes : Analyse de la sensibilité aux antibiotiques de 7814 souches d'entérobactéries isolées chez des patients hospitalisés au sein de prélèvements à visée diagnostique au cours des deux périodes considérées et mesure de la consommation en céphalosporine de 3e génération (C3G), imipénème (IMP) et fluoroquinolones (FQ). (univ-reunion.fr)
- This information IPI-145 chemical structure may potentially help clinicians interpret results of blood gas analysis and manage canine patients receiving oxygen insufflation via a nasal catheter. (mglursignaling.com)
Samples2
- By comparing the BGCs of known SM between obese and nonobese samples, we found that menaquinone produced by Enterobacter cloacae showed the highest correlation with BMI, in agreement with a recent study on human adipose tissue composition. (hindawi.com)
- Laboratory analysis of biopsied samples showed immunostaining and molecular evidence of BK virus DNA in the cancer cells. (cdc.gov)
Antibiotic3
- In summary, the overarching rationale of SATURN was to improve methodological standards and conduct research that will help to better understand the impact of antibiotic use on acquisition, selection and transmission of AMR in different environments, by combining analyses of molecular, individual patient-level and ecologic data. (europa.eu)
- Also, SATURN had as mission to improve methodological standards and conduct research to better understand the impact of antibiotic use on acquisition, selection and transmission of antibiotic-resistant bacteria (ARB) in different environments, by combining state-of-the-art analyses of molecular, ecologic and individual patient-level data. (europa.eu)
- The antibiotic resistances of Enterobacter cloacae to amoxicillin and cefazolin were high. (biomedres.info)
Clinical3
- The enteric Gram-negative bacteraemia in the ABON® immunochromatographic blood culture of the patient at the time infants with rotavirus infection who test (Abon Biopharm Ltd). of clinical deterioration (on day 8) were treated with corticosteroids for yielded E. cloaca . (who.int)
- Two days later, on we report the case of a patient with no- day 8 of her hospitalization, the patient sensitive to ceftriaxone, meropenem, socomial rotavirus-associated gastro- showed deterioration of clinical signs, amikacin, ciprofloxacin, but resistant to enteritis complicated by Enterobacter with lethargy, fever (39 °C), tachy- amoxicillin-clavulanic acid and cefuro- cloacae bacteraemia who was treated cardia (170 beats/min. (who.int)
- Enterobacter bacteremia: Clinical features, risk factors for multiresistance and mortality in a Chinese University Hospital. (medscape.com)
Pathogen2
- Enterobacter cloacae is a member of the normal gut flora of many humans and is not usually a primary pathogen. (wikipedia.org)
- Enterobacter cloacae, has only recently been perceived as a pathogen related to nosocomial infections (hospital infections). (idilbiotech.com)
Infections5
- The antimicrobials most commonly indicated in Enterobacter infections include carbapenems, fourth-generation cephalosporins, aminoglycosides, fluoroquinolones, and TMP-SMZ. (medscape.com)
- First-generation and second-generation cephalosporins are inactive against Enterobacter infections. (medscape.com)
- Third-generation cephalosporins are not indicated for the treatment of severe Enterobacter infections, perhaps with the notable exception of uncomplicated infections. (medscape.com)
- DOC for severe Enterobacter infections, except for meningitis and other CNS infections because of some reports indicating higher seizure potential. (medscape.com)
- Alternative to imipenem for severe Enterobacter infections. (medscape.com)
Closely related1
- The highest appearance frequencies (100%) were OTUs closely related to Enterobacter sp. (afpm.org.my)
Strain1
- Enterobacter cloacae strain MBB8 isolated from the Gulf of Mannar, India was reported to degrade poly vinyl alcohol (PVA). (wikipedia.org)
Detection2
- 4. Stumpf AN, Roggenkamp A, Hoffmann H. Specificity of enterobacterial repetitive intergenic consensus and repetitive extragenic palindromic polymerase chain reaction for the detection of clonality within the Enterobacter cloacae complex. (paijournal.com)
- RevoDx Enterobacter cloacae qPCR Kit is a real-time PCR test intended for the qualitative detection of Enterobacter cloacae DNA. (idilbiotech.com)
Complex1
- Genetic Diversity and Functional Analysis of Sigma Factors in Enterobacter cloacae Complex Resourced From Various Niche. (dsmz.de)
Characterization1
- In addition, the collection performs various services such as: the maintenance, preservation and distribution of crops, taxonomic characterization and genotypic analysis. (specieslink.net)
Logistic regression analysis1
- Multivariable logistic regression analysis was used to determine factors associated with referral. (elsevierpure.com)
Metagenomic analysis1
- illnesses, we analyzed gene expression and conducted metagenomic analysis. (cdc.gov)
Laboratories1
- In microbiology laboratories, E. cloacae is frequently grown at 30 °C on nutrient agar or at 35 °C in tryptic soy broth. (wikipedia.org)
Mass spectrometry2
- The production of 27 of these putative proteins was confirmed by mass spectrometry analysis. (frontiersin.org)
- Gas chromatography-mass spectrometry (GC-MS) analysis of the oil revealed that the components were eugenol, caryophyllene, eugenol acetate and alpha-humelene, with eugenol being the main component. (academicjournals.org)
Laboratory2
- Pasteurized water was sent to the Stroud Water Research Center for AOC, BDOC, and DOC analyses, and to the Risk Reduction Engineering Laboratory for the CGR assay. (stroudcenter.org)
- Laboratory troenteritis, E. cloacae septicaemia and (ACTH) for infantile spasm. (who.int)
Method1
- Enterobacter cloacae has been used in a bioreactor-based method for the biodegradation of explosives and in the biological control of plant diseases. (wikipedia.org)
Molecular analysis1
- A proof molecular analysis would allow to evaluate the risk more precisely, especially at the community level. (univ-reunion.fr)
Test1
- CGR was performed with pasteurized test water inoculated with Enterobacter cloacae . (stroudcenter.org)