Estimating dinosaur maximum running speeds using evolutionary robotics.
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Maximum running speed is an important locomotor parameter for many animals-predators as well as prey-and is thus of interest to palaeobiologists wishing to reconstruct the behavioural ecology of extinct species. A variety of approaches have been tried in the past including anatomical comparisons, bone scaling and strength, safety factors and ground reaction force analyses. However, these approaches are all indirect and an alternative approach is to create a musculoskeletal model of the animal and see how fast it can run. The major advantage of this approach is that all assumptions about the animal's morphology and physiology are directly addressed, whereas the exact same assumptions are hidden in the indirect approaches. In this paper, we present simple musculoskeletal models of three extant and five extinct bipedal species. The models predict top speed in the extant species with reasonably good agreement with accepted values, so we conclude that the values presented for the five extinct species are reasonable predictions given the modelling assumptions made. Improved musculoskeletal models and better estimates of soft tissue parameters will produce more accurate values. Limited sensitivity analysis is performed on key muscle parameters but there is considerable scope for extending this in the future. (+info)
Linear and geometric morphometric analysis of long bone scaling patterns in Jurassic neosauropod dinosaurs: their functional and paleobiological implications.
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Neosauropod dinosaurs were gigantic, herbivorous dinosaurs. Given that the limb skeleton is essentially a plastic, mobile framework that supports and moves the body, analysis of long bone scaling can reveal limb adaptations that supported neosauropod gigantism. Previously, analyses of linear dimensions have revealed a relatively isometric scaling pattern for the humerus and femur of neosauropods. Here, a combined scaling analysis of humerus and femur linear dimensions, cortical area, and shape across six neosauropod taxa is used to test the hypothesis that neosauropod long bones scaled isometrically and to investigate the paleobiological implications of these trends. A combination of linear regression and geometric morphometrics analyses of neosauropod humeri and femora were performed using traditional and thin-plate splines approaches. The neosauropod sample was very homogeneous, and linear analyses revealed that nearly all humerus and femur dimensions, including cortical area, scale with isometry against maximum length. Thin-plate splines analyses showed that little to no significant shape change occurs with increasing length or cortical area for the humerus or femur. Even with the exclusion of the long-limbed Brachiosaurus, the overall trends were consistently isometric. These results suggest that the mechanical advantage of limb-moving muscles and the relative range of limb movement decreased with increasing size. The isometric signal for neosauropod long bone dimensions and shape suggests these dinosaurs may have reached the upper limit of vertebrate long bone mechanics. Perhaps, like stilt-walkers, the absolutely long limbs of the largest neosauropods allowed for efficient locomotion at gigantic size with few ontogenetic changes. (+info)
A new Cretaceous terrestrial ecosystem from Gondwana with the description of a new sauropod dinosaur.
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A unique site at the northern area of Patagonia (Neuquen, Argentina) reveals a terrestrial ecosystem preserved in a detail never reported before in a Late Cretaceous deposit. An extraordinary diversity and abundance of fossils was found concentrated in a 0.5 m horizon in the same quarry, including a new titanosaur sauropod, Futalognkosaurus dukei n.gen., n.sp, which is the most complete giant dinosaur known so far. Several plant leaves, showing a predominance of angiosperms over gymnosperms that likely constituted the diet of F. dukei were found too. Other dinosaurs (sauropods, theropods, ornithopods), crocodylomorphs, pterosaurs, and fishes were also discovered, allowing a partial reconstruction of this Gondwanan continental ecosystem. (+info)
A basal dromaeosaurid and size evolution preceding avian flight.
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Fossil evidence for changes in dinosaurs near the lineage leading to birds and the origin of flight has been sparse. A dinosaur from Mongolia represents the basal divergence within Dromaeosauridae. The taxon's small body size and phylogenetic position imply that extreme miniaturization was ancestral for Paraves (the clade including Avialae, Troodontidae, and Dromaeosauridae), phylogenetically earlier than where flight evolution is strongly inferred. In contrast to the sustained small body sizes among avialans throughout the Cretaceous Period, the two dinosaurian lineages most closely related to birds, dromaeosaurids and troodontids, underwent four independent events of gigantism, and in some lineages size increased by nearly three orders of magnitude. Thus, change in theropod body size leading to flight's origin was not unidirectional. (+info)
Feather quill knobs in the dinosaur Velociraptor.
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Some nonavian theropod dinosaurs were at least partially covered in feathers or filamentous protofeathers. However, a complete understanding of feather distribution among theropod dinosaurs is limited because feathers are typically preserved only in lagerstatten like that of Solnhofen, Germany or Liaoning, China. Such deposits possess clear taphonomic biases toward small-bodied animals, limiting our knowledge regarding feather presence in larger members of feathered clades. We present direct evidence of feathers in Velociraptor mongoliensis based on the presence of quill knobs on the posterior forearm. This report of secondaries in a larger-bodied, derived, and clearly flightless member of a nonavian theropod clade represented by feathered relatives is a substantial contribution to our knowledge of the evolution of feathers. (+info)
Foraging modes of Mesozoic birds and non-avian theropods.
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The origin and early evolution of birds has been a major topic in evolutionary biology. In the 20th century, evolutionary scenarios posited either ground-based bird ancestors or tree-dwelling ancestors. This has since been recognised as a false dichotomy [1]. We suggest that part of the problem is the loose categorisation of many extant bird species as either ground or tree locomotors when considering hind-limb function [2-7]. In reality these are not mutually exclusive alternatives. Many extant birds exhibit different degrees of ground- and tree-based behaviours. We thus propose they can be better placed on a spectrum - rather than a dichotomy - according to the extent of ground and/or tree foraging they exhibit. To test this system we analysed the toe claws of 249 species of Holocene birds, revealing that claw curvature increases as tree foraging becomes more predominant. Improved claw morphometrics allow more direct comparisons between extant and extinct birds in order to infer the behaviours of the latter. In contrast to previous studies [2-6], we find that claw curvatures of Mesozoic birds and closely related non-avian theropod dinosaurs, differ significantly from Holocene arboreal birds and more closely resemble those of Holocene 'ground-foraging' birds. (+info)
Avian-like breathing mechanics in maniraptoran dinosaurs.
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In 1868 Thomas Huxley first proposed that dinosaurs were the direct ancestors of birds and subsequent analyses have identified a suite of 'avian' characteristics in theropod dinosaurs. Ossified uncinate processes are found in most species of extant birds and also occur in extinct non-avian maniraptoran dinosaurs. Their presence in these dinosaurs represents another morphological character linking them to Aves, and further supports the presence of an avian-like air-sac respiratory system in theropod dinosaurs, prior to the evolution of flight. Here we report a phylogenetic analysis of the presence of uncinate processes in Aves and non-avian maniraptoran dinosaurs indicating that these were homologous structures. Furthermore, recent work on Canada geese has demonstrated that uncinate processes are integral to the mechanics of avian ventilation, facilitating both inspiration and expiration. In extant birds, uncinate processes function to increase the mechanical advantage for movements of the ribs and sternum during respiration. Our study presents a mechanism whereby uncinate processes, in conjunction with lateral and ventral movements of the sternum and gastral basket, affected avian-like breathing mechanics in extinct non-avian maniraptoran dinosaurs. (+info)
A manually curated database of tetrapod mitochondrially encoded tRNA sequences and secondary structures.
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BACKGROUND: Mitochondrial tRNAs have been the subject of study for structural biologists interested in their secondary structure characteristics, evolutionary biologists have researched patterns of compensatory and structural evolution and medical studies have been directed towards understanding the basis of human disease. However, an up to date, manually curated database of mitochondrially encoded tRNAs from higher animals is currently not available. DESCRIPTION: We obtained the complete mitochondrial sequence for 277 tetrapod species from GenBank and re-annotated all of the tRNAs based on a multiple alignment of each tRNA gene and secondary structure prediction made independently for each tRNA. The mitochondrial (mt) tRNA sequences and the secondary structure based multiple alignments are freely available as Supplemental Information online. CONCLUSION: We compiled a manually curated database of mitochondrially encoded tRNAs from tetrapods with completely sequenced genomes. In the course of our work, we reannotated more than 10% of all tetrapod mt-tRNAs and subsequently predicted the secondary structures of 6060 mitochondrial tRNAs. This carefully constructed database can be utilized to enhance our knowledge in several different fields including the evolution of mt-tRNA secondary structure and prediction of pathogenic mt-tRNA mutations. In addition, researchers reporting novel mitochondrial genome sequences should check their tRNA gene annotations against our database to ensure a higher level of fidelity of their annotation. (+info)