Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci, using DNA sequences of ... Spratt, Brian G (1999). "Multilocus sequence typing: molecular typing of bacterial pathogens in an era of rapid DNA sequencing ... "Multilocus sequence typing of Streptococcus pyogenes and the relationships between emm type and clone". Infect Immun. 69 (4): ... "Molecular Typing of Selected Enterococcus faecalis Isolates: Pilot Study Using Multilocus Sequence Typing and Pulsed-Field Gel ...

... evolutionary and epidemiological inferences from multilocus sequence typing-1 ... Taken from "Species status of : evolutionary and epidemiological inferences from multilocus sequence typing" ... Species status of : evolutionary and epidemiological inferences from multilocus sequence typing-1. ...

Urogenital Chlamydia trachomatis strain types, defined by high-resolution multilocus sequence typing, in relation to ethnicity ... Urogenital Chlamydia trachomatis strain types, defined by high-resolution multilocus sequence typing, in relation to ethnicity ... based genotyping or high-resolution multilocus sequence typing (MLST). This study applied high-resolution MLST on samples of ... MLST analysis identified 175 sequence types and six large clusters; in one cluster, participants with Surinamese/Antillean ...

A Single Multilocus Sequence Typing (MLST) Scheme for Seven Pathogenic Leptospira Species ... A Single Multilocus Sequence Typing (MLST) Scheme for Seven Pathogenic Leptospira Species ... MALDI-TOF mass spectrometry for sub-typing of Streptococcus pneumoniae * Research ethics in context: understanding the ... The efficacy of PPE for COVID-19-type respiratory illnesses in primary and community care staff ...

This index was 1.76+/-0.27 when only one strain per sequence type was considered. Both results were different from 0, ... The sequences of internal fragments of seven housekeeping genes were obtained for 34 P. aeruginosa isolates from patients ... which was about six times greater than the results obtained with the multilocus enzyme electrophoresis method. Linkage ... we developed a multilocus sequence typing scheme. ...

All isolates were typed by MLST and yielded 40 sequence types (STs). A web-accessible database was set up ( http://pubmlst.org/ ... The total number of variable nucleotide sites in the concatenated MLST sequences was 103/3,501 (2.9%). Concatenated MLST ... sequences were used to construct a neighbor-joining tree which identified four phylogenetic groups of STs and one outlier (ST- ... A robust high-throughput multilocus sequence typing (MLST) scheme for Clostridium difficile was developed and validated using a ...

Most of these CRAB isolates (77.62%) were classified as clone complex 92 (CC92), and sequence type (ST) 92 was the most ... and sequence type (ST) 92 was the most prevalent STs, followed by ST195, ST136, ST843 and ST75. One CRAB isolate of ST195 ... Genetic relatedness of the isolates was characterized by multilocus sequence typing. Sixty-seven of the 110 isolates (60.9%) ... Genetic relatedness of the isolates was characterised by multilocus sequence typing (MLST). 67 of the 110 isolates (60.9%) were ...

Molecular Sequence Data Multilocus Sequence Typing Phylogeny Prevalence ... We developed a multi-locus sequence typing (MLST) scheme based on nine loci (16S rRNA, gltA, ftsZ, groEL, nuoG, ribC, rpoB, ... of Bartonella Infections in Domestic Bovine and Characterization of Bartonella bovis Strains Using Multi-Locus Sequence Typing ... of Bartonella Infections in Domestic Bovine and Characterization of Bartonella bovis Strains Using Multi-Locus Sequence Typing ...

Multilocus sequence typing (MLST), which defines strains from the sequences at seven house-keeping loci, has become the method ... Sequence data are ideal for strain characterization as they are unambiguous, meaning strains can readily be compared between ... Laboratories undertaking MLST can quickly progress from sequencing the seven gene fragments to characterizing their strains and ... phylogenetic trees based on concatenated sequences, and a recently developed method (eBURST) for identifying clonal complexes ...

Hash-based core genome multi-locus sequencing typing for Clostridium difficile EYRE D., PETO T., Crook D., WALKER A., Wilcox M. ...

Here, a multilocus sequence typing (MLST) system for this organism is described, which exploits the genetic variation present ... The allelic profiles, or sequence types (STs), of these isolates were deposited on the Internet (http://mlst.zoo.ox.ac.uk), ... Multilocus sequence typing system for Campylobacter jejuni. Dingle KE., Colles FM., Wareing DR., Ure R., Fox AJ., Bolton FE., ... Here, a multilocus sequence typing (MLST) system for this organism is described, which exploits the genetic variation present ...

In this study, multilocus sequence typing was used to charact ... Multilocus Sequence Typing (MLST) of C. albicans Isolates. The ... Multilocus sequence typing of Candida albicans isolates from the oral cavities of patients undergoing haemodialysis. Sci Rep. ... In this study, multilocus sequence typing was used to characterise the genetic diversity and population structure of 24 avian ... Multilocus sequence typing of Candida albicans isolates from animals. Res Microbiol. 2008;159(6):436-40. ...

Multilocus sequence typing of Candida albicans: strategies, data exchange and applications Share Share Share ...

... multilocus sequence typingST, sequence type The GenBank/EMBL/DDBJ accession numbers for the nucleotide sequences of the new ... DNA sequencing of 3423 bp throughout seven housekeeping genes identified eight new allele types and ten new sequence types ... The multilocus sequence typing scheme used previously for phylogenetic analysis of Escherichia coli was applied to 107 clinical ... Multilocus sequence typing analysis of Shigella flexneri isolates collected in Asian countries ...

Comparative Analysis of the Two Acinetobacter baumannii Multilocus Sequence Typing (MLST) Schemes.jpg ... multilocus sequence typingAcinetobacter baumanniicomparative genomicsphylogenysequence typesclonal complexes ... Image_2_Comparative Analysis of the Two Acinetobacter baumannii Multilocus Sequence Typing (MLST) Schemes. .jpg (. 1.43 MB. ) ... Image_2_Comparative Analysis of the Two Acinetobacter baumannii Multilocus Sequence Typing (MLST) Schemes.jpg. ...

CONCLUSIONS: Multilocus sequence typing is a useful tool for the discrimination of subtypes and examination of the population ... Forty sequence types (STs) were found, 19 of which were previously undescribed and 21 identified in other countries. The 19 ... demonstrating that STs causing disease have both a global and a local distribution evident from the typing of domestically and ... Multilocus sequence typing (MLST) was used to examine the diversity and population structure of Campylobacter jejuni isolates ...

Whole-genome multilocus sequence typing (wgMLST). wgMLST is a genotyping scheme that uses WGS data. The wgMLST scheme for TB ... Transition to whole-genome multilocus sequence typing (wgMLST) for TB cluster detection (Slide Set) pdf icon[PDF - 4 MB] ... Whole Genome Sequencing (WGS) generates DNA sequence data for the entire M. tuberculosis genome, which can be used for various ... In 2018, CDCs Division of TB Elimination (DTBE) began universal whole-genome sequencing (WGS) (i.e., sequencing an M. ...

2 Multilocus sequence type - a 7-locus genotype useful for both identifying major lineages and for species verification ... Penicillin-binding proteins (PBP) type; penicillin-binding protein transpeptidase sequence (PBP type) database for detecting ... Whole genome sequencing (WGS)1 for isolate species confirmation, capsular genotyping, and molecular typing ... Resistance mechanisms and all minimum inhibitory concentrations (MICs) on panel (and others); PBP2x amino acid sequence types ...

Multilocus sequence typing supports the hypothesis that cow- and human-associated Salmonella isolates represent distinct and ... from across New York state over the course of I year was characterized using serotyping and a multilocus sequence typing (MLST ... a number of farms showed evidence for the persistence of a specific Salmonella enterica serotype Newport sequence type. ... The 335 isolates were differentiated into 52 serotypes and 72 sequence types (STs). Analyses of bovine isolates collected on ...

Multilocus sequence typing of Candida africana from patients with vulvovaginal candidiasis in New Delhi, India Journal Articles ... and D1/D2 region sequencing and were typed by using MLST. approach. Similar to C. africana. isolates from the United Kingdom ... grew at 42°C. Sequencing of eight gene fragments in MLST. identified all four strains to have different genotypes not reported ...

An analysis of the nucleotide sequences revealed that 7 isolates (14.0%) carried 4 types of Class 1 integron cassette, ... MLST analysis showed that 32 sequence types (STs) were identified, while ST46 was the predominant genotype among all isolates. ... and multilocus sequence typing (MLST). Four pathogenic serotypes were identified among all the isolates, while the most common ... R. F. Rabello, B. M. Moreira, R. M. M. Lopes, L. M. Teixeira, L. W. Riley, and A. C. D. Castro, "Multilocus sequence typing of ...

A multilocus sequence typing (MLST) scheme based on seven housekeeping genes was used to investigate the epidemiology and ... Multilocus sequence Typing Scheme for Enterococucus faecalis Reveals Hospital-Adapted genetic Complexes in Background of High ... MLST of 110 isolates from different sources and geographic locations revealed 55 different sequence types that grouped into ...

... sequence types. In this study, 57 sequence types (STs) were identified. Statistical comparisons between the maximum-likelihood ... We describe here the development of a multilocus sequence typing (MLST) scheme for S. uberis to help address these issues. The ... sequences of seven housekeeping gene fragments from each of 160 United Kingdom milk isolates of S. uberis were determined. ... sequence types. In this study, 57 sequence types (STs) were identified. Statistical comparisons between the maximum-likelihood ...

Multilocus Sequence Typing and Evolutionary Relationships among the Causative Agents of Melioidosis and Glanders, Burkholderia ... Multilocus Sequence Typing and Evolutionary Relationships among the Causative Agents of Melioidosis and Glanders, Burkholderia ...

Multilocus sequence typing of Mycobacterium xenopi. J Clin Microbiol. 2014 Nov. 52 (11):3973-7. [QxMD MEDLINE Link]. ... Incidence of nontuberculous mycobacteria in four hot water systems using various types of disinfection. Can J Microbiol. 2008 ... Spondylitis due to Mycobacterium xenopi in a human immunodeficiency virus type 1-infected patient: case report and review of ...

Multilocus sequence typing system for Campylobacter jejuni . Journal of Clinical Microbiology 2001; 39: 14-23.CrossRefGoogle ... and multilocus sequence typing (MLST) [Reference Dingle25]. Antimicrobial susceptibility testing for azithromycin, ... An antibiotic depleted microbiome drives severe Campylobacter jejuni-mediated Type 1/17 colitis, Type 2 autoimmunity and ... Detection and typing of Campylobacter jejuni and Campylobacter coli and analysis of indicator organisms in three waterborne ...

This was inferred from sequence analysis of rrs (16S rRNA) and ot … ... Molecular Sequence Data * Multilocus Sequence Typing * Nucleic Acid Hybridization * Phylogeny* * RNA, Ribosomal, 16S / genetics ... in multilocus sequence analysis using concatenated sequences of the genes rpoB, recA, fusA, gyrB, leuS and sucA. Analysis of ... This was inferred from sequence analysis of rrs (16S rRNA) and other genetic loci and suggests that they belong to a novel ...

... typing was used to determine MAP SSR types. We concluded from these precise MAP infection data that, when the tissue burden ... All samples were cultured for MAP, and multi-locus short-sequence repeat (MLSSR) ... All samples were cultured for MAP, and multi-locus short-sequence repeat (MLSSR) typing was used to determine MAP SSR types. We ... Short Sequence Repeat Typing (SSR). SSR typing based on an 11-locus typing scheme [19] was used to determine strain designation ...