A genus of GRAM-NEGATIVE AEROBIC BACTERIA of marine origin. Many species were formerly classified under ALTEROMONAS.
A genus of gram-negative, straight or curved rods which are motile by means of a single, polar flagellum. Members of this genus are found in coastal waters and the open ocean. (From Bergey's Manual of Determinative Bacteriology, 9th ed)
A genus of GREEN ALGAE in the family Ulvaceae. Commonly know as sea lettuces, they grow attached to rocks and KELP in marine and estuarine waters.
A group of the proteobacteria comprised of facultatively anaerobic and fermentative gram-negative bacteria.
A genus of BROWN ALGAE in the family Laminariaceae. Dried pencil-like pieces may be inserted in the cervix where they swell as they absorb moisture, serving as osmotic dilators.
A large group of aerobic bacteria which show up as pink (negative) when treated by the gram-staining method. This is because the cell walls of gram-negative bacteria are low in peptidoglycan and thus have low affinity for violet stain and high affinity for the pink dye safranine.
The salinated water of OCEANS AND SEAS that provides habitat for marine organisms.
A family of icosahedral, lipid-containing, non-enveloped bacteriophages containing one genus (Corticovirus).
The continent lying around the South Pole and the southern waters of the Atlantic, Pacific, and Indian Oceans. It includes the Falkland Islands Dependencies. (From Webster's New Geographical Dictionary, 1988, p55)
Constituent of 30S subunit prokaryotic ribosomes containing 1600 nucleotides and 21 proteins. 16S rRNA is involved in initiation of polypeptide synthesis.
DNA sequences encoding RIBOSOMAL RNA and the segments of DNA separating the individual ribosomal RNA genes, referred to as RIBOSOMAL SPACER DNA.
Deoxyribonucleic acid that makes up the genetic material of bacteria.
Process by which unwanted microbial, plant or animal materials or organisms accumulate on man-made surfaces.
The relationships of groups of organisms as reflected by their genetic makeup.
The presence of bacteria, viruses, and fungi in water. This term is not restricted to pathogenic organisms.
The phylum of sponges which are sessile, suspension-feeding, multicellular animals that utilize flagellated cells called choanocytes to circulate water. Most are hermaphroditic. They are probably an early evolutionary side branch that gave rise to no other group of animals. Except for about 150 freshwater species, sponges are marine animals. They are a source of ALKALOIDS; STEROLS; and other complex molecules useful in medicine and biological research.
The study of the origin, structure, development, growth, function, genetics, and reproduction of organisms which inhabit the OCEANS AND SEAS.
A multistage process that includes cloning, physical mapping, subcloning, determination of the DNA SEQUENCE, and information analysis.
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
The relative amounts of the PURINES and PYRIMIDINES in a nucleic acid.
Large, robust forms of brown algae (PHAEOPHYCEAE) in the order Laminariales. They are a major component of the lower intertidal and sublittoral zones on rocky coasts in temperate and polar waters. Kelp, a kind of SEAWEED, usually refers to species in the genera LAMINARIA or MACROCYSTIS, but the term may also be used for species in FUCUS or Nereocystis.
Below normal weather temperatures that may lead to serious health problems. Extreme cold is a dangerous situation that can bring on health emergencies in susceptible people.
The inter- and intra-relationships between various microorganisms. This can include both positive (like SYMBIOSIS) and negative (like ANTIBIOSIS) interactions. Examples include virus - bacteria and bacteria - bacteria.
The Arctic Ocean and the lands in it and adjacent to it. It includes Point Barrow, Alaska, most of the Franklin District in Canada, two thirds of Greenland, Svalbard, Franz Josef Land, Lapland, Novaya Zemlya, and Northern Siberia. (Webster's New Geographical Dictionary, 1988, p66)
A class in the phylum MOLLUSCA comprised of mussels; clams; OYSTERS; COCKLES; and SCALLOPS. They are characterized by a bilaterally symmetrical hinged shell and a muscular foot used for burrowing and anchoring.

Structural basis of alpha-amylase activation by chloride. (1/130)

To further investigate the mechanism and function of allosteric activation by chloride in some alpha-amylases, the structure of the bacterial alpha-amylase from the psychrophilic micro-organism Pseudoalteromonas haloplanktis in complex with nitrate has been solved at 2.1 A degrees, as well as the structure of the mutants Lys300Gln (2.5 A degrees ) and Lys300Arg (2.25 A degrees ). Nitrate binds strongly to alpha-amylase but is a weak activator. Mutation of the critical chloride ligand Lys300 into Gln results in a chloride-independent enzyme, whereas the mutation into Arg mimics the binding site as is found in animal alpha-amylases with, however, a lower affinity for chloride. These structures reveal that the triangular conformation of the chloride ligands and the nearly equatorial coordination allow the perfect accommodation of planar trigonal monovalent anions such as NO3-, explaining their unusual strong binding. It is also shown that a localized negative charge such as that of Cl-, rather than a delocalized charge as in the case of nitrate, is essential for maximal activation. The chloride-free mutant Lys300Gln indicates that chloride is not mandatory for the catalytic mechanism but strongly increases the reactivity at the active site. Disappearance of the putative catalytic water molecule in this weakly active mutant supports the view that chloride helps to polarize the hydrolytic water molecule and enhances the rate of the second step in the catalytic reaction.  (+info)

Cloning and characterization of extracellular metal protease gene of the algicidal marine bacterium Pseudoalteromonas sp. strain A28. (2/130)

The gene (empI) encoding an extracellular metal protease was isolated from a Pseudoalteromonas sp. strain A28 DNA library. The recombinant EmpI protein was expressed in E. coli and purified. Paper-disk assays showed that the purified protease had potent algicidal activity. A skim milk-polyacrylamide gel electrophoresis protease assay showed that the 38-kDa band of protease activity, which co-migrated with purified EmpI and was sensitive to 1,10-phenathroline, was detected in the extracellular supernatant of A28.  (+info)

Dual effects of an extra disulfide bond on the activity and stability of a cold-adapted alpha-amylase. (3/130)

Chloride-dependent alpha-amylases constitute a well conserved family of enzymes thereby allowing investigation of the characteristics of each member to understand, for example, relevant properties required for environmental adaptation. In this context, we have constructed a double mutant (Q58C/A99C) of the cold-active and heat-labile alpha-amylase from the Antarctic bacterium Pseudoalteromonas haloplanktis, defined on the basis of its strong similarity with the mesophilic enzyme from pig pancreas. This mutant was characterized to understand the role of an extra disulfide bond specific to warm-blooded animals and located near the entrance of the catalytic cleft. We show that the catalytic parameters of the mutant are drastically modified and similar to those of the mesophilic enzyme. Calorimetric studies demonstrated that the mutant is globally stabilized (DeltaDeltaG = 1.87 kcal/mol at 20 degrees C) when compared with the wild-type enzyme, although the melting point (T(m)) was not increased. Moreover, fluorescence quenching experiments indicate a more compact structure for the mutated alpha-amylase. However, the strain imposed on the active site architecture induces a 2-fold higher thermal inactivation rate at 45 degrees C as well as the appearance of a less stable calorimetric domain. It is concluded that stabilization by the extra disulfide bond arises from an enthalpy-entropy compensation effect favoring the enthalpic contribution.  (+info)

Pseudoalteromonas translucida sp. nov. and Pseudoalteromonas paragorgicola sp. nov., and emended description of the genus. (4/130)

On the basis of phenotypic and genotypic characteristics and analysis of 16S rRNA sequences, two novel species belonging to the genus Pseudoalteromonas are described. A pale-orange-pigmented strain, KMM 3548T, isolated from a sponge and a non-pigmented strain, KMM 520T, isolated from sea water are marine, gram-negative, aerobic, rod-shaped organisms. One of the strains, KMM 520T, had bipolar flagella. Both strains had the ability to degrade gelatin, DNA and Tween 80 but not chitin or agar. Strain KMM 520T decomposed elastin and grew at NaCl concentrations of 1-8%, while strain KMM 3548T grew at 1-6% NaCl. The temperature range for both strains was 4-30 degrees C. The DNA G+C contents were 46.3 (KMM 520T) and 41.1 mol% (KMM 3548T). The level of DNA relatedness between the two strains was 20%. DNA from strain KMM 520T showed 8-34% genetic relatedness and that of KMM 3548T showed 17-53% relatedness to the DNA of other type strains of the genus Pseudoalteromonas. 16S rRNA analysis indicated a clear affiliation of these novel bacteria with the genus Pseudoalteromonas. The type strains of the novel species are Pseudoalteromonas translucida sp. nov. KMM 520T (= LMG 19696T = ATCC BAA-3157T) and Pseudoalteromonas paragorgicola sp. nov. KMM 3548T (= LMG 19694T = ATCC BAA-322T).  (+info)

The structure of a cold-adapted family 8 xylanase at 1.3 A resolution. Structural adaptations to cold and investgation of the active site. (5/130)

Enzymes from psychrophilic organisms differ from their mesophilic counterparts in having a lower thermostability and a higher specific activity at low and moderate temperatures. The current consensus is that they have an increased flexibility, enhancing accommodation and transformation of the substrates at low energy costs. Here we describe the structure of the xylanase from the Antarctic bacterium Pseudoalteromonas haloplanktis at 1.3 A resolution. Xylanases are usually grouped into glycosyl hydrolase families 10 and 11, but this enzyme belongs to family 8. The fold differs from that of other known xylanases and can be described as an (alpha/alpha)(6) barrel. Various parameters that may explain the cold-adapted properties were examined and indicated that the protein has a reduced number of salt bridges and an increased exposure of hydrophobic residues. The crystal structures of a complex with xylobiose and of mutant D144N were obtained at 1.2 and 1.5 A resolution, respectively. Analysis of the various substrate binding sites shows that the +3 and -3 subsites are rearranged as compared to those of a family 8 homolog, while the xylobiose complex suggests the existence of a +4 subsite. A decreased acidity of the substrate binding cleft and an increased flexibility of aromatic residues lining the subsites may enhance the rate at which substrate is bound.  (+info)

Activity-stability relationships in extremophilic enzymes. (6/130)

Psychrophilic, mesophilic, and thermophilic alpha-amylases have been studied as regards their conformational stability, heat inactivation, irreversible unfolding, activation parameters of the reaction, properties of the enzyme in complex with a transition state analog, and structural permeability. These data allowed us to propose an energy landscape for a family of extremophilic enzymes based on the folding funnel model, integrating the main differences in conformational energy, cooperativity of protein unfolding, and temperature dependence of the activity. In particular, the shape of the funnel bottom, which depicts the stability of the native state ensemble, also accounts for the thermodynamic parameters of activation that characterize these extremophilic enzymes, therefore providing a rational basis for stability-activity relationships in protein adaptation to extreme temperatures.  (+info)

MC21-A, a bactericidal antibiotic produced by a new marine bacterium, Pseudoalteromonas phenolica sp. nov. O-BC30(T), against methicillin-resistant Staphylococcus aureus. (7/130)

We previously reported a new marine bacterium, Pseudoalteromonas phenolica sp. nov. O-BC30(T), which produced a bactericidal antibiotic against methicillin-resistant Staphylococcus aureus (MRSA). In the present study, we purified an anti-MRSA substance (MC21-A) from the methanol extract of the cells of P. phenolica O-BC30(T) and analyzed its chemical structure. MC21-A was determined to be 3,3',5,5'-tetrabromo-2,2'-biphenyldiol by spectrometric analyses. Its anti-MRSA activity against 10 clinical isolates of MRSA was comparable to that of vancomycin (MC21-A MICs, 1 to 2 micro g/ml; vancomycin MICs, <0.25 to 2 micro g/ml). This substance was also high active against Enterococcus serolicida, Enterococcus faecium, and Enterococcus faecalis but was less active against Streptococcus spp. A time-kill study also demonstrated that MC21-A was bactericidal and that its killing rate was much higher than that of vancomycin. The postantibiotic effect (PAE) of MC21-A against a clinical MRSA isolate, strain E 31243, was also comparable to that of vancomycin (MC21-A PAEs, 1.46 to 1.65 h; vancomycin PAEs, 0.84 to 1.43 h). However, a lysis experiment demonstrated that this substance failed to lyse MRSA cells. This substance also did not lyse human erythrocytes. A SYTOX Green staining experiment implied that this substance permeabilized the cell membrane of MRSA as its mode of action. When its activities against a hypersensitive Escherichia coli mutant (KO 1489) and wild-type strains were tested, MC21-A exhibited higher levels of activity against the former. Furthermore, MC21-A was not cytotoxic to human normal fibroblast, rat pheochromocytoma, and Vero cells at concentrations up to 50 micro g/ml. These results suggest that MC21-A might be useful as a lead compound in the development of new types of anti-MRSA substances with modes of action different from those of vancomycin and teicoplanin.  (+info)

Pseudoalteromonas agarivorans sp. nov., a novel marine agarolytic bacterium. (8/130)

The phenotypic, genomic and phylogenetic characteristics of four aerobic, Gram-negative, non-fermentative, motile, non-pigmented, agarolytic Pseudoalteromonas-like bacteria, isolated from marine environments, have been investigated. These bacteria share DNA-DNA similarities above 86%. Comparative 16S rDNA sequence analysis of strain KMM 255T revealed its membership of the genus Pseudoalteromonas; it shares 99.9% sequence similarity with Pseudoalteromonas distincta, Pseudoalteromonas elyakovii, Pseudoalteromonas atlantica and Pseudoalteromonas espejiana. DNA-DNA reassociation levels obtained for strain KMM 255T and type strains of these four species and other Pseudoalteromonas species were below 45%. The marine isolates differed from known species of the genus by the fact that the cells are motile by means of a single flagellum or two to four polar unsheathed flagella and by an inability to utilize most organic compounds. On the basis of phenotypic, DNA-DNA hybridization and phylogenetic data, it is concluded that the isolates represent a novel species within the genus Pseudoalteromonas, for which the name Pseudoalteromonas agarivorans sp. nov. is proposed. The type strain is strain KMM 255T (= DSM 14585T).  (+info)

Pseudoalteromonas is a genus of gram-negative, aerobic, rod-shaped bacteria that are commonly found in marine environments. They are known to produce a variety of bioactive compounds with potential applications in biotechnology and medicine. The cells of Pseudoalteromonas species are typically motile and may form single or paired cells, as well as short chains. They can be pigmented and may produce various extracellular products such as exopolysaccharides, proteases, and pigments. Some species of Pseudoalteromonas have been reported to cause infections in humans, particularly in immunocompromised individuals, but they are not considered a major human pathogen.

"Alteromonas" is a genus of gram-negative, aerobic bacteria that are commonly found in marine environments. These bacteria are known for their ability to produce various enzymes and metabolites that allow them to adapt to and thrive in the diverse conditions found in the ocean. Some species of Alteromonas have been shown to have potential applications in bioremediation, as they are able to break down oil and other pollutants. They may also play a role in carbon cycling in the ocean, as they are capable of utilizing various organic compounds as a source of energy.

It's important to note that while Alteromonas species are generally not harmful to humans, some strains have been found to be opportunistic pathogens, causing infections in individuals with weakened immune systems. However, such cases are relatively rare.

"Ulva" is a genus of green algae, also known as sea lettuce. It is a common marine plant that can be found in both fresh and saltwater environments worldwide. Ulva species are characterized by their thin, leaf-like blades that can vary in color from bright green to yellowish-green. They play an essential role in the aquatic ecosystem as they provide food and shelter for various marine organisms. Additionally, they can reproduce both sexually and asexually, contributing to their rapid growth and ability to form large colonies or mats. However, when they grow excessively, they can become a nuisance, known as "green tides," which can have negative impacts on the environment and local economies.

Gammaproteobacteria is a class of proteobacteria, a group of Gram-negative bacteria. This class includes several important pathogens that can cause various diseases in humans, animals, and plants. Some examples of Gammaproteobacteria include Escherichia coli (a common cause of food poisoning), Pseudomonas aeruginosa (a leading cause of hospital-acquired infections), Vibrio cholerae (the causative agent of cholera), and Yersinia pestis (the bacterium that causes plague).

Gammaproteobacteria are characterized by their single flagellum, which is used for motility, and their outer membrane, which contains lipopolysaccharides that can elicit an immune response in host organisms. They are found in a wide range of environments, including soil, water, and the guts of animals. Some species are capable of fixing nitrogen, making them important contributors to nutrient cycling in ecosystems.

It's worth noting that while Gammaproteobacteria includes many pathogenic species, the majority of proteobacteria are not harmful and play important roles in various ecological systems.

"Laminaria" is a genus of brown algae that grows in cooler waters and is often used in medical procedures as a preparation for dilating the cervix. The dried and sterilized form of Laminaria japonica, a species of this seaweed, is known as "Laminaria tents" or "Laminaria sticks." These are gradually inserted into the cervix where they absorb water and expand over a period of hours, dilating the cervix. This is most commonly done in preparation for a surgical procedure such as a dilation and curettage (D&C) or an abortion. It's important to note that this process should be performed by a healthcare professional in a clinical setting.

Gram-negative aerobic bacteria are a type of bacteria that do not retain the crystal violet stain used in the Gram staining method, which is a technique used to differentiate bacterial species based on their cell wall composition. These bacteria have a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides (LPS), making them resistant to many antibiotics and disinfectants. They are called aerobic because they require oxygen for their growth and metabolism. Examples of Gram-negative aerobic bacteria include Escherichia coli, Pseudomonas aeruginosa, and Klebsiella pneumoniae. These bacteria can cause various infections in humans, such as pneumonia, urinary tract infections, and sepsis.

Seawater is not a medical term, but it is a type of water that covers more than 70% of the Earth's surface. Medically, seawater can be relevant in certain contexts, such as in discussions of marine biology, environmental health, or water safety. Seawater has a high salt content, with an average salinity of around 3.5%, which is much higher than that of freshwater. This makes it unsuitable for drinking or irrigation without desalination.

Exposure to seawater can also have medical implications, such as in cases of immersion injuries, marine envenomations, or waterborne illnesses. However, there is no single medical definition of seawater.

I apologize, but there seems to be no medical or scientific definition for "Corticoviridae" as it is not a recognized term in virology or medicine. It's possible that there may be some confusion with the taxonomic family of viruses called "Corticoidespiraceae," which includes bacteriophages that infect bacteria from the genus Corticoides. However, this is not directly related to human health or medicine. If you have any other questions or need information on a different topic, please let me know!

The Antarctic regions typically refer to the geographical areas surrounding the continent of Antarctica, including the Southern Ocean and various subantarctic islands. These regions are known for their extreme cold, ice-covered landscapes, and unique wildlife adapted to survive in harsh conditions. The Antarctic region is also home to important scientific research stations focused on topics such as climate change, marine life, and space exploration. It's worth noting that the Antarctic Treaty System governs these regions, which prohibits military activity, mineral mining, nuclear testing, and nuclear waste disposal, and promotes scientific research and cooperation among nations.

Ribosomal RNA (rRNA) is a type of RNA that combines with proteins to form ribosomes, which are complex structures inside cells where protein synthesis occurs. The "16S" refers to the sedimentation coefficient of the rRNA molecule, which is a measure of its size and shape. In particular, 16S rRNA is a component of the smaller subunit of the prokaryotic ribosome (found in bacteria and archaea), and is often used as a molecular marker for identifying and classifying these organisms due to its relative stability and conservation among species. The sequence of 16S rRNA can be compared across different species to determine their evolutionary relationships and taxonomic positions.

Ribosomal DNA (rDNA) refers to the specific regions of DNA in a cell that contain the genes for ribosomal RNA (rRNA). Ribosomes are complex structures composed of proteins and rRNA, which play a crucial role in protein synthesis by translating messenger RNA (mRNA) into proteins.

In humans, there are four types of rRNA molecules: 18S, 5.8S, 28S, and 5S. These rRNAs are encoded by multiple copies of rDNA genes that are organized in clusters on specific chromosomes. In humans, the majority of rDNA genes are located on the short arms of acrocentric chromosomes 13, 14, 15, 21, and 22.

Each cluster of rDNA genes contains both transcribed and non-transcribed spacer regions. The transcribed regions contain the genes for the four types of rRNA, while the non-transcribed spacers contain regulatory elements that control the transcription of the rRNA genes.

The number of rDNA copies varies between species and even within individuals of the same species. The copy number can also change during development and in response to environmental factors. Variations in rDNA copy number have been associated with various diseases, including cancer and neurological disorders.

Bacterial DNA refers to the genetic material found in bacteria. It is composed of a double-stranded helix containing four nucleotide bases - adenine (A), thymine (T), guanine (G), and cytosine (C) - that are linked together by phosphodiester bonds. The sequence of these bases in the DNA molecule carries the genetic information necessary for the growth, development, and reproduction of bacteria.

Bacterial DNA is circular in most bacterial species, although some have linear chromosomes. In addition to the main chromosome, many bacteria also contain small circular pieces of DNA called plasmids that can carry additional genes and provide resistance to antibiotics or other environmental stressors.

Unlike eukaryotic cells, which have their DNA enclosed within a nucleus, bacterial DNA is present in the cytoplasm of the cell, where it is in direct contact with the cell's metabolic machinery. This allows for rapid gene expression and regulation in response to changing environmental conditions.

Biofouling is the accumulation of microorganisms, algae, plants, and animals on wet surfaces, such as the hulls of ships, pier pilings, and buoys. This growth can have negative impacts on the performance and efficiency of equipment and infrastructure, leading to increased maintenance costs and potential environmental damage. In the medical field, biofouling can also refer to the undesirable accumulation of microorganisms or biomolecules on medical devices, which can lead to infection or device failure.

Phylogeny is the evolutionary history and relationship among biological entities, such as species or genes, based on their shared characteristics. In other words, it refers to the branching pattern of evolution that shows how various organisms have descended from a common ancestor over time. Phylogenetic analysis involves constructing a tree-like diagram called a phylogenetic tree, which depicts the inferred evolutionary relationships among organisms or genes based on molecular sequence data or other types of characters. This information is crucial for understanding the diversity and distribution of life on Earth, as well as for studying the emergence and spread of diseases.

Water microbiology is not a formal medical term, but rather a branch of microbiology that deals with the study of microorganisms found in water. It involves the identification, enumeration, and characterization of bacteria, viruses, parasites, and other microscopic organisms present in water sources such as lakes, rivers, oceans, groundwater, drinking water, and wastewater.

In a medical context, water microbiology is relevant to public health because it helps to assess the safety of water supplies for human consumption and recreational activities. It also plays a critical role in understanding and preventing waterborne diseases caused by pathogenic microorganisms that can lead to illnesses such as diarrhea, skin infections, and respiratory problems.

Water microbiologists use various techniques to study water microorganisms, including culturing, microscopy, genetic analysis, and biochemical tests. They also investigate the ecology of these organisms, their interactions with other species, and their response to environmental factors such as temperature, pH, and nutrient availability.

Overall, water microbiology is a vital field that helps ensure the safety of our water resources and protects public health.

Porifera, also known as sponges, is a phylum of multicellular aquatic organisms characterized by having pores in their bodies. These pores allow water to circulate through the body, bringing in food and oxygen while expelling waste products. Sponges do not have true tissues or organs; instead, they are composed of specialized cells that perform specific functions. They are generally sessile (non-mobile) and live attached to rocks, coral reefs, or other underwater structures. Some species can be quite large, while others are microscopic in size. Sponges have a long fossil record dating back over 500 million years and play important roles in marine ecosystems as filter feeders and habitat providers for many other marine organisms.

I apologize for the confusion, but "Marine Biology" is not a medical term. Instead, it is a branch of biology that deals with the study of marine organisms, their behaviors, and their interactions with the marine environment. Marine biologists investigate various aspects of marine life, such as the ecology, physiology, and genetics of marine plants, animals, and microorganisms. They also study the impact of human activities on marine ecosystems and work towards conservation efforts to protect these environments.

DNA Sequence Analysis is the systematic determination of the order of nucleotides in a DNA molecule. It is a critical component of modern molecular biology, genetics, and genetic engineering. The process involves determining the exact order of the four nucleotide bases - adenine (A), guanine (G), cytosine (C), and thymine (T) - in a DNA molecule or fragment. This information is used in various applications such as identifying gene mutations, studying evolutionary relationships, developing molecular markers for breeding, and diagnosing genetic diseases.

The process of DNA Sequence Analysis typically involves several steps, including DNA extraction, PCR amplification (if necessary), purification, sequencing reaction, and electrophoresis. The resulting data is then analyzed using specialized software to determine the exact sequence of nucleotides.

In recent years, high-throughput DNA sequencing technologies have revolutionized the field of genomics, enabling the rapid and cost-effective sequencing of entire genomes. This has led to an explosion of genomic data and new insights into the genetic basis of many diseases and traits.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

Base composition in genetics refers to the relative proportion of the four nucleotide bases (adenine, thymine, guanine, and cytosine) in a DNA or RNA molecule. In DNA, adenine pairs with thymine, and guanine pairs with cytosine, so the base composition is often expressed in terms of the ratio of adenine + thymine (A-T) to guanine + cytosine (G-C). This ratio can vary between species and even between different regions of the same genome. The base composition can provide important clues about the function, evolution, and structure of genetic material.

I'm sorry for any confusion, but "Kelp" is not a medical term. It is a type of large brown seaweed that grows in underwater forests called kelp beds or kelp forests. Kelps are important in the aquatic ecosystem as they provide food and shelter for many marine organisms. They are also used in various industries such as food, agriculture, and pharmaceuticals. If you have any medical term or concept you would like me to define or explain, I'd be happy to help!

Extreme cold is a term used to describe abnormally low temperatures that can be harmful or dangerous to human health. According to the National Weather Service, "extreme cold" is defined as temperatures that fall below 0 degrees Fahrenheit (-18 degrees Celsius) or wind chill readings that are lower than -20 degrees Fahrenheit (-29 degrees Celsius).

Prolonged exposure to extreme cold can lead to hypothermia, which occurs when the body loses heat faster than it can produce it, causing a dangerously low body temperature. Symptoms of hypothermia include shivering, exhaustion, confusion, fumbling hands, memory loss, slurred speech, and eventually unconsciousness.

Extreme cold can also cause frostbite, which is the freezing of the skin and underlying tissues. Frostbite typically affects the extremities, such as the fingers, toes, ears, and nose, and can cause numbness, tingling, aching, and blistering of the skin. In severe cases, frostbite can lead to tissue damage and loss of limbs.

To protect against extreme cold, it is important to dress in layers, wear warm clothing, cover exposed skin, stay dry, and avoid prolonged exposure to cold temperatures. It is also recommended to stay indoors during extreme cold weather events and to have a emergency plan in place in case of power outages or other emergencies.

Microbial interactions refer to the various ways in which different microorganisms, such as bacteria, fungi, viruses, and parasites, influence each other's growth, survival, and behavior in a shared environment. These interactions can be categorized into several types:

1. Commensalism: One organism benefits from the interaction while the other is neither harmed nor benefited (e.g., certain gut bacteria that feed on host-derived nutrients without affecting the host's health).
2. Mutualism: Both organisms benefit from the interaction (e.g., the partnership between rhizobia bacteria and leguminous plants, where the bacteria fix nitrogen for the plant, and the plant provides carbohydrates for the bacteria).
3. Parasitism: One organism benefits at the expense of the other, causing harm or disease to the host (e.g., the malaria parasite infecting human red blood cells).
4. Competition: Both organisms struggle for limited resources, like nutrients or space, leading to a negative impact on one or both parties (e.g., different bacterial species competing for limited iron sources in the environment).
5. Amensalism: One organism is harmed or inhibited while the other remains unaffected (e.g., antibiotic-producing bacteria inhibiting the growth of nearby susceptible bacteria).
6. Synergism: Multiple organisms work together to produce a combined effect greater than the sum of their individual effects (e.g., certain bacterial and fungal communities in soil that enhance plant growth and nutrient uptake).
7. Antagonism: One organism inhibits or kills another through various mechanisms, such as the production of antibiotics or enzymes (e.g., some bacteria producing bacteriocins to inhibit the growth of closely related species).

Understanding microbial interactions is crucial for developing strategies in areas like infectious disease control, probiotic applications, and managing microbial communities in various ecosystems, including the human body.

The Arctic region is not a medical term per se, but it is a geographical and environmental term that can have health-related implications. The Arctic is defined as the region surrounding the North Pole, encompassing the Arctic Ocean and parts of Canada, Greenland (Denmark), Russia, the United States (Alaska), Norway, Sweden, Finland, and Iceland. It is characterized by its cold climate, permafrost, and unique ecosystems.

Exposure to the harsh Arctic environment can pose significant health risks, such as hypothermia, frostbite, and other cold-related injuries. Additionally, the Arctic region has been impacted by climate change, leading to changes in the distribution of wildlife, which can have implications for food security and infectious disease transmission.

Therefore, while not a medical term itself, understanding the Arctic regions and their unique environmental and health challenges is important in fields such as wilderness medicine, environmental health, and public health.

Bivalvia is a class of mollusks, also known as "pelecypods," that have a laterally compressed body and two shells or valves. These valves are hinged together on one side and can be opened and closed to allow the animal to feed or withdraw into its shell for protection.

Bivalves include clams, oysters, mussels, scallops, and numerous other species. They are characterized by their simple body structure, which consists of a muscular foot used for burrowing or anchoring, a soft mantle that secretes the shell, and gills that serve both as respiratory organs and feeding structures.

Bivalves play an important role in aquatic ecosystems as filter feeders, helping to maintain water quality by removing particles and organic matter from the water column. They are also commercially important as a source of food for humans and other animals, and their shells have been used historically for various purposes such as tools, jewelry, and building materials.

2002) Pseudoalteromonas marina (Nam et al. 2007) Pseudoalteromonas mariniglutinosa (ex Berland et al. 1969) Pseudoalteromonas ... 2002) Pseudoalteromonas tunicata (Holmström et al. 1998) Pseudoalteromonas ulvae (Egan et al. 2001) Pseudoalteromonas undina ( ... 2003) Pseudoalteromonas aliena (Ivanova et al. 2004) Pseudoalteromonas antarctica (Bozal et al. 1997) Pseudoalteromonas arctica ... 1987) Pseudoalteromonas distincta (Romanenko et al. 1995) Pseudoalteromonas donghaensis (Oh et al. 2011) Pseudoalteromonas ...
Fermentation optimization and enzyme characterization of a new ι-Carrageenase from Pseudoalteromonas carrageenovora ASY5 ... Fermentation optimization and enzyme characterization of a new ι-Carrageenase from Pseudoalteromonas carrageenovora ASY5 ...
Pseudoalteromonas issachenkonii is a Gram-negative, rod-shaped, flagellated, aerobic, chemoorganotrophic marine bacterium that ... Complete genome of brown algal polysaccharides-degrading Pseudoalteromonas issachenkonii KCTC 12958(T) (=KMM 3549(T)). Authors: ... Pseudoalteromonas issachenkonii is a Gram-negative, rod-shaped, flagellated, aerobic, chemoorganotrophic marine bacterium that ...
Pseudoalteromonas aliena SW19. Taxonomy ID: 1314866 (for references in articles please use NCBI:txid1314866). current name. ... cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas; ...
Allows to visualize regulon content in the context of metabolic pathways ...
We undertook this study to estimate genomic diversity in Pseudoalteromonas atlantica populations and whether the diversity, if ... We undertook this study to estimate genomic diversity in Pseudoalteromonas atlantica populations and whether the diversity, if ... Biogeographic patterns in populations of marine Pseudoalteromonas atlantica isolates. FEMS microbiology letters, 370. http:// ...
The cold-adapted g-glutamyl-cysteine ligase from the psychrophile Pseudoalteromonas haloplanktis. Albino A;De Angelis A;Marco S ... A recombinant gamma-glutamyl-cysteine ligase from the psychrophile Pseudoalteromonas haloplanktis (rPhGshA II) was produced and ... A recombinant gamma-glutamyl-cysteine ligase from the psychrophile Pseudoalteromonas haloplanktis (rPhGshA II) was produced and ...
The Pseudoalteromonas sp. 3J6 genome was sequenced, and a candidate alt gene was identified by comparing the genome-encoded ... alt genes were found in about 30% of the Pseudoalteromonas genomes and in only a few instances of other marine bacteria of the ... Alterocin, an Antibiofilm Protein Secreted by Pseudoalteromonas sp. Strain 3J6. 0. On 2020-12-072020-12-07By Bioinformatics ... We sought to identify and study the antibiofilm protein secreted by the marine bacterium Pseudoalteromonas sp. strain 3J6. The ...
Pseudoalteromone a, a ubiquinone derivative from marine pseudoalteromonas spp., suppresses melanogenesis. Su Jin Lim, Dae Jin ... Pseudoalteromone a, a ubiquinone derivative from marine pseudoalteromonas spp., suppresses melanogenesis. In: Marine Drugs. ... Pseudoalteromone a, a ubiquinone derivative from marine pseudoalteromonas spp., suppresses melanogenesis. / Lim, Su Jin; Min, ... Pseudoalteromone a, a ubiquinone derivative from marine pseudoalteromonas spp., suppresses melanogenesis. Marine Drugs. 2021 ...
Enhancement of growth and paramylon production of Euglena gracilis by co-cultivation with Pseudoalteromonas sp. MEBiC 03485. ... Enhancement of growth and paramylon production of Euglena gracilis by co-cultivation with Pseudoalteromonas sp. MEBiC 03485. / ... Enhancement of growth and paramylon production of Euglena gracilis by co-cultivation with Pseudoalteromonas sp. MEBiC 03485. In ... This study investigated the putative effects of co-cultivation of Euglena gracilis with Pseudoalteromonas sp. MEBiC 03485 on ...
Pseudoalteromonas phage pYD6-A. "Fuhrmanvirinae". "Mazuvirus". Pseudomonas phage 98PfluR60PP. "Littlefixvirus". [40]. ...
Purification and Characterization of a Bifunctional Alginate Lyase from Pseudoalteromonas sp. SM0524 by Jian-Wei Li ... In an optimized condition, the production of alginate lyase from Pseudoalteromonas sp. SM0524 reached 62.6 U/mL, suggesting ... In an optimized condition, the production of alginate lyase from Pseudoalteromonas sp. SM0524 reached 62.6 U/mL, suggesting ... An alginate lyase-producing bacterial strain, Pseudoalteromonas sp. SM0524, was screened from marine rotten kelp. ...
Mechanisms for pseudoalteromonas piscicida-induced killing of vibrios and other bacterial pathogens - (Peer Reviewed Journal) ... Mechanisms for pseudoalteromonas piscicida-induced killing of vibrios and other bacterial pathogens. Applied and Environmental ...
Pseudoalteromonas Ferment Extract. * Glyceryl Caprylate. * Disteardimonium Hectorite. * Xanthan Gum. * Polyglyceryl-2 ...
Pseudoalteromonas rhizosphaerae sp. nov., a novel plant growth-promoting bacterium with potential use in phytoremediation. En: ...
For example, Pseudoalteromonas tunicata resides on the surface of the marine alga Ulva lactuca and the tunicate Ciona ... Inhibition of algal spore germination by the marine bacterium Pseudoalteromonas tunicata. FEMS Microbiol. Ecol. 35, 67-73. doi ... Inhibition of fungal colonization by Pseudoalteromonas tunicata provides a competitive advantage during surface colonization. ...
Ability of Pseudoalteromonas tunicata to colonize natural biofilms and its effect on microbial community structure. FEMS ... like pilus promotes attachment of Pseudoalteromonas tunicata cells to the surface of the green alga Ulva australis. ... Biofilm development and cell death in the marine bacterium pseudoalteromonas tunicata. Applied and Environmental Microbiology, ... Ecological advantages of autolysis during the development and dispersal of pseudoalteromonas tunicata biofilms. Applied and ...
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1. MB Duhaime, A Wichels, J Waldmann, H Teeling, FO Gl ...
Researchers have found that a bacteria called Pseudoalteromonas luteoviolacea must be present for H. elegans to metamorphose. ...
and Pseudoalteromonas sp.) and sterilized sediment under oxic conditions showed that the rate and total quantity of organic ... Approximately twice as much respired CO2 was collected during the Pseudoalteromonas sp. incubations compared to the Vibrio sp. ...
LSN-49T was most closely related to Pseudoalteromonas , Algicola and Psychrosphaera and showed 89.3-92.1 % sequence similarity ... Ivanova EP, Sawabe T, Lysenko AM, Gorshkova NM, Hayashi K et al. Pseudoalteromonas translucida sp. nov. and Pseudoalteromonas ... Nam YD, Chang HW, Park JR, Kwon HY, Quan ZX et al. Pseudoalteromonas marina sp. nov., a marine bacterium isolated from tidal ... Lau SC, Tsoi MM, Li X, Dobretsov S, Plakhotnikova Y et al. Pseudoalteromonas spongiae sp. nov., a novel member of the γ- ...
Discovery of New Antibiotic Potentials Through Co-Culture of Marine Bacteria Pseudoalteromonas Luteoviolacea and Vibrio ... Influence Of Microbial Secondary Metabolites on the Interaction Between the Two Marine Bacteria, Pseudoalteromonas, And ... This includes studies of bacteria such as Roseobacter, Pseudoalteromonas, Vibrio, Shewanella, fluorescent pseudomonads or ...
Marine bacteria from danish coastal waters show antifouling activity against the marine fouling bacterium Pseudoalteromonas sp ...
Pseudoalteromonas Spp.. n/a. Schulz and Dickschat, 2007. Bacteria. Pseudomonas Sp.. n/a. Schulz and Dickschat, 2007. ...
safensis and N. aquimarinus (CE), N. aquimarinus and Pseudoalteromonas (BF) and B. infantis and Pseudoalteromonas (AF) with ... venusta and Pseudoalteromonas (BDF), H. venusta, B. safensis and Pseudoalteromonas (DCF), B. infantis, H. venusta and N. ... aquimarinus and Pseudoalteromonas (ADEF) which was 82.7% and B. cereus, B. safensis, H. venusta and Pseudoalteromonas (BCDF) ... aquimarinus and Pseudoalteromonas (BDEF) which was 87.3%, B. infantis, B. safensis, H. venusta and Pseudoalteromonas (ACDF) ...
Scientists believe that toxins in newts are caused by bacteria in the genera Pseudoalteromonas, Pseudomonas and Vibrio. Because ...
Pseudoalteromonas. in Gr. lemaneiformis. and Gl. furcata. , Sulfitobacter. in P. yezoensis. and an undefined cluster within ... Pseudoalteromonas. , Pseudomonas. , and Vibrio. , in a total of 33 genera, were frequently associated with the three groups of ... Pseudoalteromonas. strains inhibited settlement and also induced paralysis and lysing of Enteromorpha. zoospores [46]. A ... Pseudoalteromonas, Vibrio, Cobetia, Shewanella, Colwellia, Marinomonas,. and Paraglaceciola. ). Regarding the total bacterial ...
7). This virus shared a viral cluster with the siphovirus Pseudoalteromonas phage vB_PspS-H6/1 but we were not able to ... CBA: Cellulophaga phage; PSA: Pseudoalteromonas phage. The relative abundances of mock viral community members were strongly ... viruses were cultivated from host Pseudoalteromonas or Cellulophaga via plaque assay, collected into MSM buffer (0.45 M NaCl, ...
Pseudoalteropeptide A, a novel lipopeptide from the marine bacterium Pseudoalteromonas piscicida SWA4_PA4 isolated from marine ...

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