An enzyme involved in the MEVALONATE pathway, it catalyses the synthesis of farnesyl diphosphate from isopentenyl diphosphate and dimethylallyl diphosphate.

Effect of the hypocholesterolemic agent YM-16638 on cholesterol biosynthesis activity and apolipoprotein B secretion in HepG2 and monkey liver. (1/144)

YM-16638 ([[5-[[3-(4-acetyl-3-hydroxy-2-propylphenoxy)propyl]thio]-1,3,4-++ +thiadiazol-2-yl] thio] acetic acid) showed a strong hypocholesterolemic effect in humans and monkeys. To clarify the mechanism of this hypocholesterolemic effect, the action of YM-16638 on cholesterol biosynthesis in the cultured human hepatoma cell line HepG2 and cynomolgus monkey liver was examined. Cholesterol biosynthesis activity derived from [14C]acetic acid, [3H/14C]mevalonic acid or [14C]isopentenyl pyrophosphate substrates was significantly decreased, but not that from [3H]farnesyl pyrophosphate or [3H]squalene substrates in HepG2 cells treated with YM-16638. Simultaneously, treatment of these cells with YM-16638 changed neither the rate of apolipoprotein B synthesis from [35S]methionine nor its secretion. In addition, the activities of hepatic cholesterol biosynthesis enzymes HMG-CoA reductase, mevalonate kinase (MK), isopentenyl pyrophosphate isomerase (IPPI), farnesyl pyrophosphate synthase (FPPS), squalene synthase and squalene epoxidase were measured in monkeys fed a diet supplemented with YM-16638. Among these enzymes, MK, IPPI and FPPS activities in the YM-16638-treated group significantly decreased by 38%, 56% and 30%, respectively, when compared to those from control animals receiving no drug treatment. These results indicate that YM-16638 has the characteristics of a cholesterol biosynthesis inhibitor.  (+info)

Identification of the GGPS1 genes encoding geranylgeranyl diphosphate synthases from mouse and human. (2/144)

E,E,E-Geranylgeranyl diphosphate (GGPP) is an important precursor of carotenoids and geranylgeranylated proteins such as small G proteins. In this study, we have identified mouse and human GGPP synthase genes. Sequence analysis showed that mouse and human GGPP synthases share a high level of amino acid identity (94%) with each other, and share a high level of similarity (45-50%) with GGPP synthases of lower eukaryotes, but only weak similarity (22-31%) to plant and prokaryotic GGPP synthases. Both of the newly identified GGPP synthase genes from mouse and human were expressed in Escherichia coli, and their gene products displayed GGPP synthase activity when isopentenyl diphosphate and farnesyl diphosphate were used as substrates. The GGPP synthase activity of these genes was also confirmed by demonstrating carotenoid synthesis after co-transformation of E. coli with a plasmid expressing the crt genes derived from Erwinia uredovora, and a plasmid expressing either the mouse or human GGPS1 gene. Southern blot analysis suggests that the human GGPS1 gene is a single copy gene.  (+info)

YY1 is a negative regulator of transcription of three sterol regulatory element-binding protein-responsive genes. (3/144)

Ying Yang 1 (YY1) is shown to bind to the proximal promoters of the genes encoding 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) synthase, farnesyl diphosphate (FPP) synthase, and the low density lipoprotein (LDL) receptor. To investigate the potential effect of YY1 on the expression of SREBP-responsive genes, HepG2 cells were transiently transfected with luciferase reporter constructs under the control of promoters derived from either HMG-CoA synthase, FPP synthase, or the LDL receptor genes. The luciferase activity of each construct increased when HepG2 cells were incubated in lipid-depleted media or when the cells were cotransfected with a plasmid encoding mature sterol regulatory element-binding protein (SREBP)-1a. In each case, the increase in luciferase activity was attenuated by coexpression of wild-type YY1 but not by coexpression of mutant YY1 proteins that are known to be defective in either DNA binding or in modulating transcription of other known YY1-responsive genes. In contrast, incubation of cells in lipid-depleted media resulted in induction of an HMG-CoA reductase promoter-luciferase construct by a process that was unaffected by coexpression of wild-type YY1. Electromobility shift assays were used to demonstrate that the proximal promoters of the HMG-CoA synthase, FPP synthase, and the LDL receptor contain YY1 binding sites and that YY1 displaced nuclear factor Y from the promoter of the HMG-CoA synthase gene. We conclude that YY1 inhibits the transcription of specific SREBP-dependent genes and that, in the case of the HMG-CoA synthase gene, this involves displacement of nuclear factor Y from the promoter. We hypothesize that YY1 plays a regulatory role in the transcriptional regulation of specific SREBP-responsive genes.  (+info)

Molecular cloning and tissue expression of an insect farnesyl diphosphate synthase. (4/144)

The enzyme farnesyl-diphosphate synthase (FPS, EC2.5.1.1/EC2.5.1.10), which has been shown to play a key role in isoprenoid biosynthesis, catalyzes the synthesis of farnesyl diphosphate from isopentenyl diphosphate and di-methylallyl diphosphate. Insects do not synthesize cholesterol de novo, rather farnesyl diphosphate leads to the formation of nonsterol isoprenoids, which are essential for insect development and reproduction. In this paper, we describe the characterization of one FPS from the moth Agrotis ipsilon, the first insect FPS to be reported. An homologous probe was obtained through a nested PCR strategy using degenerate primers designed from the conserved domains of FPS from other organisms. The complete cDNA clone was isolated by PCR screening of a brain cDNA library by using homologous primers deduced from the probe. Analysis of the nucleotide sequence revealed that the cDNA encodes a polypeptide of 412 amino acids (Mr = 47 170), which shares regions similar to the FPS of other organisms, but exhibits singularities such as an extra N-terminal extension of approximately 70 amino acid residues. Using an RNase protection assay, a protected fragment corresponding to the region encoding the FPS catalytic site was found in brain, ovary, fat body and corpora allata samples, but not in muscle. FPS is overexpressed in the corpora allata, the endocrine gland that produces the juvenile hormones. These hormones are specific to insects and play a crucial role in regulating insect physiology.  (+info)

Differential binding of proteins to peroxisomes in rat hepatoma cells: unique association of enzymes involved in isoprenoid metabolism. (5/144)

Farnesyl diphosphate synthase (FPPS: EC2.5.1.10), a key enzyme in isoprenoid metabolic pathways, catalyzes the synthesis of farnesyl diphosphate (FPP) an intermediate in the biosynthesis of both sterol and non-sterol isoprenoid end products. The localization of FPPS to peroxisomes has been reported (Krisans, S. K., J. Ericsson, P. A. Edwards, and G. A. Keller. 1994. J. Biol. Chem. 269: 14165;-14169). Using indirect immunofluorescence and immunoelectron microscopic techniques we show here that FPPS is localized predominantly in the peroxisomes of rat hepatoma H35 cells. However, the partial release of 60;-70% of cellular FPPS activity is observed by selective permeabilization of these cells with digitonin. Under these conditions, lactate dehydrogenase, a cytosolic enzyme, is completely released whereas catalase, a known peroxisomal enzyme, is fully retained. Digitonin treatment of H35 cells differentially affects the release of other peroxisomal enzymes involved in isoprenoid metabolism. For instance, mevalonate kinase and phosphomevalonate kinase are almost totally released (95% and 91%, respectively), whereas 3-hydroxy-3-methylglutaryl-CoA reductase is fully retained. Indirect immunoflourescence studies indicate that FPPS is localized in peroxisomes of Chinese hamster ovary (CHO)-K1 cells but is dispersed in the cytosol of ZR-82 cells, a mutant that lacks peroxisomes. Unlike in H35 cells, FPPS is completely released upon digitonin permeabilization of CHO-K1 and ZR-82 cells. In contrast, under the same permeabilization conditions, catalase is fully retained in CHO-K1 cells but completely released from ZR-82 cells. These studies indicate that FPPS and other enzymes in the isoprenoid biosynthetic pathways, involved in the formation of FPP, are differentially associated with peroxisomes and may easily diffuse to the cytosol. Based on these observations, the significance and a possible regulatory model in the formation of isoprenoid end-products are discussed.  (+info)

A highly conserved signal controls degradation of 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase in eukaryotes. (6/144)

Sterol synthesis by the mevalonate pathway is modulated, in part, through feedback-regulated degradation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMGR). In both mammals and yeast, a non-sterol isoprenoid signal positively regulates the rate of HMGR degradation. To define more precisely the molecule that serves as the source of this signal, we have conducted both pharmacological and genetic manipulations of the mevalonate pathway in yeast. We now demonstrate that farnesyl diphosphate (FPP) is the source of the positive signal for Hmg2p degradation in yeast. This FPP-derived signal does not act by altering the endoplasmic reticulum degradation machinery in general. Rather, the FPP-derived signal specifically modulates Hmg2p stability. In mammalian cells, an FPP-derived molecule also serves as a positive signal for HMGR degradation. Thus, both yeast and mammalian cells employ the same strategy for regulation of HMGR degradation, perhaps by conserved molecular processes.  (+info)

Expression pattern of genes encoding farnesyl diphosphate synthase and sesquiterpene cyclase in cotton suspension-cultured cells treated with fungal elicitors. (7/144)

Cotton plants accumulate sesquiterpene aldehydes in pigment glands. The two enzymes farnesyl diphosphate synthase (FPS) and (+)-delta-cadinene synthase (CAD), a sesquiterpene cyclase, are involved in the biosynthesis of these secondary metabolites. A full-length cDNA (garfps) encoding FPS was isolated from Gossypium arboreum and identified by in vitro enzymatic assay of the garfps protein heterologously expressed in Escherichia coli. Treatment of G. arboreum suspension-cultured cells with an elicitor preparation obtained from the phytopathogenic fungus Verticillium dahliae dramatically induced transcription of both FPS and CAD, paralleling the accumulation of the sesquiterpene aldehydes in these cells. For G. australe, a wild species from Australia, the V. dahliae elicitor preparation also caused an induction of FPS but only a low rate of induction of CAD, apparently because of a constitutive expression of the sesquiterpene cyclase gene in suspension-cultured cells. Two transcripts and proteins of FPS were detected in the elicited G. australe cells; the smaller FPS seemed to be de novo synthesized after elicitation. Furthermore, G. australe-cultured cells accumulated the cadinene, instead of sesquiterpene aldehydes, indicating that the biosynthetic pathway leading to sesquiterpene aldehydes was absent or blocked after FPP cyclization.  (+info)

Activation of promoters for cellular lipogenic genes by hepatitis B virus large surface protein. (8/144)

Hepatitis B virus large surface protein has the unusual property of accumulating in a particulate form within a preGolgi compartment, leading to marked proliferation of intracellular membranes. We show here that large surface protein activates the promoters for two lipogenic genes that code for farnesyl diphosphate synthase and fatty acid synthase. This activation is transduced, in part, by the transcription factor NF-Y. Although NF-Y is also necessary for the transcriptional induction of chaperone proteins residing in the endoplasmic reticulum by unfolded proteins, other inducers of chaperone synthesis do not activate the promoters for farnesyl diphosphate synthase and fatty acid synthase. Our results suggest the presence of a novel signaling pathway from the endoplasmic reticulum to the nucleus that causes the intracellular membrane proliferation seen in the hepatocytes of persons with accumulated large surface protein particles.  (+info)

Geranyltranstransferase is not a commonly used medical term, but it is a type of enzyme involved in the biosynthesis of various compounds in the body. According to biochemistry and molecular biology resources, Geranyltranstransferase (GTT) is an enzyme that catalyzes the head-to-tail condensation of geranyl diphosphate with isopentenyl diphosphate to form farnesyl diphosphate.

Farnesyl diphosphate is a key intermediate in the biosynthesis of steroids, sesquiterpenes, and other isoprenoid compounds. These compounds have diverse functions in the body, including serving as components of cell membranes, hormones, and signaling molecules.

In summary, Geranyltranstransferase is a biochemical term that refers to an enzyme involved in the biosynthesis of various isoprenoid compounds through the condensation of geranyl diphosphate with isopentenyl diphosphate.

In enzymology, a geranyltranstransferase (EC 2.5.1.10) is an enzyme that catalyzes the chemical reaction geranyl diphosphate + ... The systematic name of this enzyme class is geranyl-diphosphate:isopentenyl-diphosphate geranyltranstransferase. Other names in ... The structure and mechanism of farnesyl pyrophosphate synthase (FPPS), a type of geranyltranstransferase, is well characterized ...
Geranyltranstransferase (IspA). Oligo-state. homo-dimer. SMTL ID. 3llw.2. Ligands. SULFATE ION. Polypeptides. ...
Geranyltranstransferase. Model: RECON1. Reaction:. grdp_c + ipdp_c → frdp_c + ppi_c ...
... geranyltranstransferase , GGDPS , GGPPS , GGPPS1 , GGPPSase , GGPP synthase , GGPS , GGSP1 ...
Geranyltranstransferase Medicine & Life Sciences 77% * isopentenyl pyrophosphate Medicine & Life Sciences 73% * Zoledronic Acid ...
Geranyltranstransferase. 96.17%. PM0083993. 76. A0A6M2Y668. GTPase Obg. 96.22%. PM0084050. 77. A0A6M2Y5Y3. tRNA (guanine-N(1 ...
DAngelica, M. I., Ellis, R. J., Liu, J. B., Brajcich, B. C., Gönen, M., Thompson, V. M., Cohen, M. E., Seo, S. K., Zabor, E. C., Babicky, M. L., Bentrem, D. J., Behrman, S. W., Bertens, K. A., Celinski, S. A., Chan, C. H. F., Dillhoff, M., Dixon, M. E. B., Fernandez-Del Castillo, C., Gholami, S., House, M. G., & 17 othersKaranicolas, P. J., Lavu, H., Maithel, S. K., McAuliffe, J. C., Ott, M. J., Reames, B. N., Sanford, D. E., Sarpel, U., Scaife, C. L., Serrano, P. E., Smith, T., Snyder, R. A., Talamonti, M. S., Weber, S. M., Yopp, A. C., Pitt, H. A. & Ko, C. Y., May 9 2023, In: JAMA. 329, 18, p. 1579-1588 10 p.. Research output: Contribution to journal › Article › peer-review ...
Blondel, S.; Egesipe, A-L; Picardi, P.; Jaskowiak, A-L; Notarnicola, M.; Ragot, J.; Tournois, J.; Le Corf, A.; Brinon, B.; Poydenot, P.; Georges, P.; Navarro, C.; Pitrez, P. R. ; Ferreira, L. ; Bollot, G.; Bauvais, C.; Laustriat, D.; Mejat, A.; De Sandre-Giovannoli, A.; Levy, N.; Bifulco, M.; Peschanski, M.; Nissan, X. ...
geranyltranstransferase activity. IEP. Neighborhood. MF. GO:0004550. nucleoside diphosphate kinase activity. IEP. Neighborhood ...
Dive into the research topics where Kelsey A Klute is active. These topic labels come from the works of this person. Together they form a unique fingerprint ...
Stampolaki, M., Malwal, S. R., Alvarez-Cabrera, N., Gao, Z., Moniruzzaman, M., Babii, S. O., Naziris, N., Rey-Cibati, A., Valladares-Delgado, M., Turcu, A. L., Baek, K. H., Phan, T. N., Lee, H., Alcaraz, M., Watson, S., van der Watt, M., Coertzen, D., Efstathiou, N., Chountoulesi, M., Shoen, C. M., & 13 othersPapanastasiou, I. P., Brea, J., Cynamon, M. H., Birkholtz, L. M., Kremer, L., No, J. H., Vázquez, S., Benaim, G., Demetzos, C., Zgurskaya, H. I., Dick, T., Oldfield, E. & Kolocouris, A. D., Feb 10 2023, In: ACS Infectious Diseases. 9, 2, p. 342-364 23 p.. Research output: Contribution to journal › Article › peer-review ...
farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity ...
FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE AT3G56150. Predicted. two hybrid ... FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE AT2G18450. Predicted. Affinity ...
Set function to geranyltranstransferase from original annotations 5/3/2010. rapid_propogation. Set function to ... Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) based on FIGfams 2/18/2013. gjo. Set master function to ( ...
","geranyltranstransferase [Ensembl]. Polyprenyl synthetase [Interproscan].","protein_coding" "AAC73544","ppiD","Escherichia ...
... geranyltranstransferase), isoform CRA_a [Homo sapiens] 1.0e-35 ...
Geranyltranstransferase. *Glutathione Transferase. *Hydroxymethylbilane Synthase. *Methionine Adenosyltransferase. *Riboflavin ...
Geranyltranstransferase Activity. *Poly(A) RNA Binding. *Metal Ion Binding. Biological Process. *Negative Regulation Of ...
Geranyltranstransferase [D08.811.913.225.450] * Glutathione Transferase [D08.811.913.225.500] * Hydroxymethylbilane Synthase [ ...
geranyltranstransferase activity. transferase activity. GGPS1 (H. sapiens). PET10 YKR046C No diseases in record ...
geranyltranstransferase activity. dimethylallyltranstransferase activity. No GO terms in record. RPS24A YER074W No diseases in ...
Geranyltranstransferase Grants and funding * ANR-14-CE12-0003/Agence Nationale de la Recherche/International ...
Squalene synthase catalyzes the biosynthesis of squalene, a key cholesterol precursor, through a reductive dimerization of two farnesyl diphosphate (FPP) molecules. The reaction is unique when compared with those of other FPP-utilizing enzymes and proceeds in two distinct steps, both of which involv …
Geranyltranstransferase (substance). Code System Preferred Concept Name. Geranyltranstransferase (substance). Concept Status. ...
Geranyltranstransferase Preferred Term Term UI T104383. LexicalTag NON. ThesaurusID NLM (2006). Farnesyl Pyrophosphate ... Geranyltranstransferase Preferred Concept UI. M0074380. Registry Number. EC 2.5.1.10. Scope Note. An enzyme involved in the ... Geranyltranstransferase. Tree Number(s). D08.811.913.225.450. Unique ID. D051228. RDF Unique Identifier. http://id.nlm.nih.gov/ ...
Geranyltranstransferase Preferred Term Term UI T104383. LexicalTag NON. ThesaurusID NLM (2006). Farnesyl Pyrophosphate ... Geranyltranstransferase Preferred Concept UI. M0074380. Registry Number. EC 2.5.1.10. Scope Note. An enzyme involved in the ... Geranyltranstransferase. Tree Number(s). D08.811.913.225.450. Unique ID. D051228. RDF Unique Identifier. http://id.nlm.nih.gov/ ...
Geranyltranstransferase - Preferred Concept UI. M0074380. Scope note. An enzyme involved in the MEVALONATE pathway, it ... Geranyltranstransferase Entry term(s). Diphosphate Synthase, Farnesyl Diphosphate Synthetase, Farnesyl FPP Synthetase Farnesyl ... Geranyltranstransferase Entry term(s):. Diphosphate Synthase, Farnesyl. Diphosphate Synthetase, Farnesyl. FPP Synthetase. ...
geranyltranstransferase (NCBI). 292, 321. GSU1877. fabK. oxidoreductase, 2-nitropropane dioxygenase family (NCBI). 71, 292. ...
Dive into the research topics where Moorthy Palanimuthu Ponnusamy is active. These topic labels come from the works of this person. Together they form a unique fingerprint ...
ID: GO:0033847 Type: http://bio2vec.net/ontology/gene_function Label: O-phosphoserine sulfhydrylase activity Synonyms: O-phosphoserine sulfhydrylase activity Alternative IDs: als API: GO SPARQL: GO ...
geranyltranstransferase (RefSeq). 122, 234. BSU24290. xseB. exodeoxyribonuclease VII small subunit (RefSeq). 122, 234. ...
Set function to putative geranyltranstransferase from original annotations 11/26/2009. rapid_propogation. Set function to ... Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) based on FIGfams 2/18/2013. gjo. Set master function to ( ...
N0000166672 Gentisates N0000168316 Geranylgeranyl-Diphosphate Geranylgeranyltransferase N0000168318 Geranyltranstransferase ...
... geranyltranstransferase, polyprenyl synthetase and farnesyldiphosphate synthase. A polyprenyl synthase is found (OG_242, Table ...
Metabolite ppi_c in iNRG857_1313. Diphosphate.
Metabolite ppi_c in iAF1260b. Diphosphate.
HN - 2006(1991) MH - Geranyltranstransferase UI - D051228 MN - D8.811.913.225.450 MS - An enzyme involved in the MEVALONATE ...
... geranyltranstransferase) (farnesyl pyrophosphate synthetase) [Ensembl].","protein_coding" "CCP43990","No alias","Mycobacterium ...

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